Malania oleifera: 131152713
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Entry
131152713 CDS
T09312
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131152713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131152713
03012 Translation factors [BR:
mof03012
]
131152713
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131152713
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131152713
Translation factors [BR:
mof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131152713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
NACHT
ATPase
ABC_tran
AAA_11
NPHP3_N
AAA_7
Dicer_dimer
Myosin_head
PhoH
Motif
Other DBs
NCBI-GeneID:
131152713
NCBI-ProteinID:
XP_057960509
LinkDB
All DBs
Position
4:44107033..44175095
Genome browser
AA seq
1227 aa
AA seq
DB search
MNALQFPIPSPPPSVHPKTLKPSITAQPFPMMKDRPPSSYGSVYVPPHHRRLRSVITTPA
SSNLSSSATDAAADADDSKALDTRPSALNSRNSPPLPYFQNHNHHHPHPHPHHQQHQPPV
PLPPLQLQKKNSAHDLVFDEFSEEGSDREIESSLPPGASTFDNVEEWKWKLTMLLRNKDK
QELASREKKDRRDFEQIAALASRMGLYSHVYVKVVVVSKVPLPNYRFDLDDRRPQREVIL
SPGLQRRVEAYLEEYLSQMSKNLGSFRDIAFSRSSSSGSIATDEGLFEQPEPLSASKPFM
EKIIRQRSLLLLNQQQAWQESPEGIKMLEFRRSLPAYKEKDALLMAISENQVVIISGETG
CGKTTQIPQFILESETESVHGALCNIICTQPRRISAMSVSERVAAERGEKLGESVGYKVR
LEGMKGRDTHLLFCTTGILLRRLLADRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPR
RPELRLILMSATLDAELFSSYFAGAPIIQIPGFTYPVRTHFLENILEMTGYRLTSYNQID
DYGQERMWKMNKQAPRKRKSQIASVVEDALRGADFKEYSPQTRESLYYWNPDIIGFNLIE
NLLCNICEKEGPGAVLVFMTGWDDISSLRDKLQAHPILGDPSKVLLLACHGSMASSEQRL
IFDEPEDGVRKIVLATNIAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISKVS
AQQRRGRAGRVQPGECYHLYPRCVYEAFADYQLPEILRTPLQSLCLQIKSLKLGSISEFL
SRALQSPELLAVQNAIEYLKIIGALDANENLTVLGRYLTMLPVEPKLGKMLIFGAIFNCL
DPILTIAAGLSVRDPFLTPLDKKDLAETAKAQFSRDYSDHLALVRAYEGWKDAERDLAGY
EYCWKNFLSFQSMKAIDALRKEFFSLLKDTGLVDSYTATCNAWSHDLYLIRAVICSGLYP
GICSVVHNEKSFSLKTMEDGQVLLYSNSVNARESRIPYSWLVFNEKIKVNSVFLRDSTAV
SDSVLLLFGGSISRADIDGHLKMLGGYLEFFMKPAVAEMYQSLRRELEELIQSKLLNPRM
GLHSHHELLSAVRLLVSDDQCEGRFVFGRQILKPLKPSVRAMPPALVSRTESGPGGDNSK
SQLQTLLTRAGYAAPTYKTKQLKNGQFRATAEFNGMQIMGQPCTNKKSAEKDAAAEALQW
LTGGTQAGHDYLEHMSMLLKKSKKEHN
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccctgcaattcccaatcccttctcctcctccttctgtgcatcccaaaacccta
aaaccctcaatcactgcacaacccttccccatgatgaaggaccggcctccttcatcgtac
ggctccgtttacgtccctccccaccatcgtcgtctcaggtccgtcatcactacgccagct
tcctccaacctctcctcctctgccaccgacgcggccgccgacgccgacgactccaaggct
ctggacactcggccctcggctctcaactctcgaaacagtcctcctttgccgtattttcaa
aaccacaaccaccatcatcctcatcctcatcctcatcatcagcaacatcagccgccagtc
ccgctgccaccgctacagctgcagaagaagaattcggcgcatgatttggtgtttgatgag
ttctcagaggaagggtccgaccgcgaaattgagtcatcgctgcccccgggggcttccaca
tttgataatgttgaagaatggaaatggaagttaaccatgcttttacggaacaaggataag
caagagttggcatcaagggagaaaaaggaccgacgagattttgagcagatagcagctctg
gccagcagaatgggtctgtatagtcatgtgtatgtaaaagttgttgttgttagcaaggtc
ccactgccgaactacagatttgatttggatgataggcgtccgcaacgggaggtgatttta
tctcctggtttgcaaagaagagtggaagcctatcttgaagagtacctttctcaaatgtct
aagaatctgggcagttttcgagatattgccttttcaaggtcaagtagcagtggtagtatt
gctactgatgaagggctttttgagcaaccagaacctttgtcagctagtaagcctttcatg
gagaaaatcattcggcagagaagtttgctattgttgaatcagcaacaagcttggcaggaa
tctccagaaggaataaaaatgctggaatttcgtaggagtcttcctgcttataaagagaaa
gatgcattattaatggctatttcagaaaatcaggtggttatcatctctggtgaaactggt
tgcggcaaaactacgcaaattcctcaattcatactagaatctgagacggaatcggttcac
ggtgctctttgtaatattatatgcacacagcctcgacgaatatctgctatgtctgtttct
gaaagagttgctgcagagaggggggagaagttgggtgaatctgttggatataaagttcgg
cttgagggcatgaaaggaagggatacacacctcctcttctgcaccacaggcatcttgttg
agacgattgttggctgacagaaatttgaaaggtgttactcacgttattgtggatgaaatt
catgagcgtggaatgaatgaagattttctgcttattgtcttgaaagatctccttcctcgt
cggccagaattgaggctgattttgatgagtgcaaccttagatgcagaacttttttcttca
tactttgctggggctcctatcattcaaattccaggtttcacatacccggttcgaacacat
ttcctggaaaatattctggaaatgactggatatcgattgacctcatataatcaaattgat
gattatggtcaagaaagaatgtggaagatgaacaaacaagctccgaggaagagaaagagc
caaattgcttctgttgttgaggatgctctcagaggtgctgattttaaggagtatagccca
caaacccgagagtctttgtactattggaatcctgatattattggatttaaccttatagag
aatcttttatgcaatatatgtgagaaagaaggacctggagctgttctagtttttatgact
gggtgggatgatataagttctttgagggataagctccaagcccatcctattttgggagat
ccaagcaaagtcttgttgcttgcatgccatggttctatggcaagctcggagcagaggtta
atatttgatgagcctgaagatggagtaaggaaaatagttctagctactaatattgctgag
actagcatcacaattaatgatgtggtttttgttgttgactgtggaaaggcaaaagagact
tcatatgatgctctgaataatacaccttgtttgcttccttcctggatatccaaggtttct
gctcaacaaagaagaggaagagctggtcgtgttcaacctggtgaatgctatcatctctat
cctagatgtgtatatgaagcttttgcagattatcaattgccagaaattctgaggacacct
ttgcagtccctttgtttgcaaatcaaaagtttgaaacttggaagtatttctgagtttcta
tctagggctttgcaatcaccagagttattagcggttcaaaatgccattgaatatttaaaa
atcattggggctttggatgcgaatgaaaatctgactgttttaggacggtacttgacaatg
ctaccagtcgagccgaagcttggaaaaatgcttatatttggggcaattttcaattgcctg
gatcctatattaactattgctgctggccttagcgttagagatcctttcttgacaccattg
gacaaaaaagatttggcagaaactgcaaaagcccaattttcccgtgattacagtgaccac
cttgcacttgtccgggcctatgagggctggaaagatgctgagagagacctagctggatat
gaatactgctggaaaaattttctttccttccaatcaatgaaagctattgatgctcttcga
aaggagttcttctctttgctcaaggatactggacttgttgatagttacacagctacctgc
aatgcatggagccatgatttgtatctcatccgagcagttatttgctctggcctgtaccct
ggaatttgctctgttgtgcataacgagaagtccttctcactgaaaacaatggaggatggt
caggtgcttctgtattcgaactctgtcaatgctcgggaatctagaattccatattcatgg
ctagttttcaatgagaagataaaggtaaattctgtttttctgcgggactcaacggctgtg
tctgattcagtgctgctcttatttggtggaagcatctcaagagctgatattgatgggcac
ttgaaaatgctgggtggctacttggagttcttcatgaaacctgctgtagcagagatgtat
caatctttaagaagagagcttgaggagctaattcagagcaagctactgaatcccaggatg
ggcttgcacagccatcacgaactcttgtctgctgtgcgtttgttggtttctgatgatcaa
tgtgaaggccgatttgtctttggtcgacagattcttaagcctttgaaaccatctgtcaga
gcaatgccaccagccttggtttctaggactgaaagtggacctgggggtgataactctaag
agccagctccaaacattgctcaccagagcaggatatgctgcacccacttacaagacaaag
caactgaagaatggccaattcagagccactgcagagttcaatggtatgcaaatcatgggg
caaccttgcaccaacaagaagtctgcggaaaaagatgcagctgctgaggctcttcagtgg
ctgactggtgggacccaggctggccatgattatctagagcacatgtcaatgttgctgaaa
aagagcaagaaggaacataactag
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