Malania oleifera: 131152934
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Entry
131152934 CDS
T09312
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
mof
Malania oleifera
Pathway
mof03013
Nucleocytoplasmic transport
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131152934
09122 Translation
03013 Nucleocytoplasmic transport
131152934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131152934
03041 Spliceosome [BR:
mof03041
]
131152934
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131152934
Spliceosome [BR:
mof03041
]
Complex C
Other components
EJC/TREX
131152934
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131152934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
FapA
LIM_bind
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
131152934
NCBI-ProteinID:
XP_057960883
LinkDB
All DBs
Position
4:complement(61774396..61857971)
Genome browser
AA seq
1899 aa
AA seq
DB search
MSIPPIQCIYITEDCLQEWKSGNPSFRVPKPVPMLRFLYELCWSLVRGELPFQKCKLALE
SVEFLDKVSNEEMASNFADIVTQMAQDITMSGENRSRLIKLAKWLVESSLVPLKLFQERC
EEEFLWESEMIKIKAQDLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQGSEAS
TQNVSSATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDSNVFLGLIPIFPKSHASQILG
FKFQYYQHIEVNSPVPFGLYQLTALLVKGEFIDLDSIYVHLLPKDDEAFEHYNAISAKRL
EEANKIGRINLAATGKDLMDDEKQGDVTIDLFAALDMETEAAAERSSELENNQTLGVLTG
FLSVDDWHHAHILLDRLSPLNPVAHIQICNGLFRLIEKSISSAYDVVRQTHLQSFGLPSG
AALDSMDTNSSGQSSFIDLPKELFEMLTSAGPFLHRDALLLQKVCRVLRGYYLSAVEHLD
ACDGAWNPKPGAGGNWTPRLHLKEARARIEEALGTCLLPSLQLIPANPAVGQEIWEVMNL
LSYEVRYRLYGEWEKEDERMPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHAN
PMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDVLEYVVIERLAQGGREKLKDDGLNL
SDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGNGIELVLMQELIQQMANVQYTEN
MTEDQLDAMAGSDTLRYQATSFGITRNNKALIKSTNRLRDSLLPKEEPKLAIPLLLLIAQ
HRSVVVINADAPYIKMVCEQFDRCHGTLLQYVEFLCSAVTPPTAYAQLIPPLEDLIHQYH
LDPEVAFLIFRPVMRLFKCPGNADVFWPLDDSEATAISTVEKDSETADLTGALVLDLGSP
HKPVMWSELLDTVRTMLPSKAWNSLSPDLYATFWGLTLYDLYVPRNRYESEIAKLHAALK
TLEELSDNSSSAITKRKKDKERIQESLDRLTTELQKHEENVSSVRRRLAREKDKWLSSCP
DTLKINMEFLQRCIFPRCTFSMPDAVYCAVFVHTLHSLGTPFFNTVNHIDVLICKTLQPM
ICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYSQF
IKVHWKWSQRITRLLIQCLESAEYMEIRNALLMLTKISSVFPVTRKSGINLEKRVTKIKS
DEREDLKVLATGVGAALAARKPSWVTEEEFGMGYLELKPASSLASKSLANNAVTVQNGGS
SLNIAQSESAGGRQSATGSQHLDSGNSAKEVRTKHTDGRLERTESVSTLKSDLGNAKLKG
GSLVNGSDSQSSLPSATPQSGSSRSIDNQKLIDESTNSAIDENLIKTASMMPAESESRAA
VKRSVAAGSLSKPSKQELAKDDGKSGMTIGRTPGSSTTDRDPHSHPAEGRQGVAVNVSTA
VSANGNTGSVSISVKGISSTRTSLDTHGSELKVESGAARSCDLRVSTAKDDGTEDIPRSS
SSRSIHSPRHDNNVTASKTSDKQSKRISSTEEPDRLNKRRKGDTEVRDSDADVRFPDRER
PMDPRLVDRIHPADIEKSGSDEQGINKVIDKHLDRSKDKGIERHDRDYRERLERSDKSRG
DDLLVEKSRDRSLERYGRERSVERVQERGSERSFDKLTERGKDERNKDDRSKLRYSETEK
SHLDDRFHGQSLPPPPPLPPNLVPQSVNAGRRDEDADRRFGTARHTQRLSPRHEEKERRR
SEENSLVSQDDAKRRRDDDFRDRKRDEREGLSMKVEERDRDRDREKVNLLKEEMDASAAS
KRRKLKREHMPSGELGEYSPALPPPTLAIGMSHSYDGRERGDRKGGMVQRAGYLEEPGLR
IHGKEVAGKMTRRDADPMYDREWDEDKRQRVEPKRRHRK
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcccacccatacagtgcatatacataacagaggactgccttcaagaatggaaa
agcggaaatcctagctttagagtccccaagccagttcccatgcttcgctttctctatgag
ctttgctggagcttggtccgcggagagttaccgtttcagaaatgtaaattagcattagag
tcggttgagtttttggataaagtttcgaatgaagagatggcctcaaattttgctgatata
gtcacccaaatggctcaggacattacgatgtcaggggagaatcgatcccgtcttatcaaa
ttggcaaaatggcttgtggaatcttcactggttccattgaagctttttcaggagcgctgt
gaggaagaatttctctgggagtccgaaatgatcaagataaaggctcaagatttgaagtct
aaagaggtcagagtaaatacacgccttctttaccagcaaacaaaatttaaccttcttcgg
gaggagagtgaaggctatgccaaactggttacccttctttgtcagggttctgaagcttcg
actcaaaatgtatcatcagcaacaataggaattattaagtctttaataggacactttgat
ctggatccgaaccgtgtttttgatattgttttggagtgttttgaacttcagcctgacagc
aatgtatttttgggcctgattcctattttcccaaagtctcatgcttcacaaatccttggg
tttaagttccaatattatcagcatattgaagttaatagtcctgtgccttttgggttgtat
caactgacagctttgctggtgaagggagagtttattgatcttgatagcatatatgtacat
ttacttcccaaggatgatgaggcatttgaacattataatgccatctctgccaagcggctt
gaagaggctaacaaaattggcagaataaatcttgctgctactgggaaagatcttatggat
gatgaaaaacaaggagatgtcacaattgatctttttgctgctttagacatggaaactgaa
gcagctgctgaacgttcttcagaacttgaaaataatcagactttgggagtgcttactgga
tttctttctgtggatgactggcatcatgcccacatactattagatcgtctgtcgccgctt
aatccagtggctcatattcaaatttgtaatggcttgtttaggctcattgagaagtcaatt
tcttctgcatatgatgttgttcgccaaacacatctacaaagttttgggttgccctcagga
gctgctctggattccatggacacaaattcatctggacagagctctttcattgatcttccc
aaagaactttttgagatgcttacttctgctgggccatttctccatcgggatgctttattg
ttgcagaaggtgtgtagagttttgagaggttactatctgtctgcagttgagcatctggat
gcttgtgatggagcttggaatcctaaacctggtgctggtggaaattggactccccgtctg
cacctaaaggaagctagggctaggattgaagaagctttgggaacatgtctacttccttcc
ttacagttgattccagctaatccagcagttgggcaggagatttgggaagtaatgaatctg
ctttcatacgaggttcggtaccgtttatatggtgagtgggaaaaggaagatgagcggatg
ccgatggttttggctgcaaggcagacagcaaagttggacaccagaaggatcttgaaacgg
cttgcaaaagaaaatttaaagcagctgggtcggatggttgcaaagcttgcacatgccaat
ccaatgactgtgcttcgtacaattgttcatcagattgaggcctatagggatatgattact
cctgttgtagatgcattcaagtatttgacacagcttgagtatgatgttttggaatatgtt
gtgattgagcgcttggcacaaggggggcgggagaagctaaaagatgatggccttaattta
tcagattggcttcagtcgttggcttcattctggggccatttgtgcaagaagtacccatca
atggaattgaggggccttttccaatatcttgtgaatcaattgaaaaaggggaatggaatt
gagcttgttcttatgcaggagcttatacaacaaatggcaaatgtccaatacactgagaat
atgactgaggatcagttggatgccatggcaggaagtgatacactccggtaccaggctact
tcttttgggataacccgaaacaataaggcattgatcaaatctactaataggctaagggac
tcgctgcttccaaaagaggaaccgaagttggcaattccgctattgttgcttattgctcaa
catcgctctgtggttgtcataaatgctgatgcgccttatattaagatggtttgtgagcag
tttgatagatgccatggaactcttctccagtatgtggagttcctctgtagtgcagtaaca
cctccaacagcttatgctcagctgataccccctcttgaagatcttatccaccagtatcac
cttgatcctgaggtggcttttttaatttttcggcctgtgatgaggctcttcaagtgtccc
ggtaatgccgatgtattttggcctttagatgacagtgaggctacagcaatctcaacagta
gaaaaagattctgaaactgcagatttaactggcgctctggtgcttgatctgggctctcct
cataaacctgttatgtggtcagagctccttgatactgttagaactatgttgccttcaaaa
gcctggaatagcctctctcctgatctatatgcgaccttttggggactcactctctatgat
ctctatgttccacgaaaccgttatgaatctgaaattgccaaactgcatgctgctcttaaa
actctagaagagctctctgataattcgagttcagcaataactaaaagaaagaaagacaag
gaaagaattcaagaatctctagatcgtctgactactgaactccagaagcatgaggaaaat
gtttcttctgttcgcagacggcttgctcgtgaaaaggacaagtggttaagttcatgtcct
gatactttaaagattaacatggagttccttcagcgttgtattttcccacgctgtactttt
agcatgccagatgctgtatattgcgccgtgtttgtacatactcttcattcccttgggaca
cctttttttaatacagtcaaccacattgacgttttgatatgtaaaaccttacaacctatg
atatgctgctgcactgaatatgaagctggtaggcttggcaggtttctgtatgagacttta
aagattgcttactattggaagagtgatgaatcaatatatgaacgtgaatgtggaaacatg
ccaggctttgctgtttattatagatatccaaatagccagcgtgttacgtacagccagttt
attaaggttcactggaaatggagtcaaagaatcacacggttattaatccagtgcttggag
tccgctgagtatatggaaatccgaaatgcgctattaatgttgacaaaaatttctagtgtt
ttcccagttactcggaagagtgggatcaaccttgaaaaacgggttacaaaaatcaaaagt
gacgaaagagaagatctcaaggtgctggctacaggtgttggtgcagccttggctgctaga
aagccttcatgggttacagaagaggaatttggcatgggttaccttgagctaaagcctgca
tcatcacttgcctcaaaatccttagctaataatgcagtaactgtacaaaatggcggttcc
agccttaacattgctcaaagtgaatctgctgggggacgacaaagtgccacaggttcccaa
catttagattctgggaattctgccaaagaagtaagaacaaaacatacagatgggaggttg
gaaagaacagaaagtgtttcaactcttaaatctgatctaggaaatgcaaaactaaagggt
ggctcgttggtaaatgggtcagatagtcagtcatccctgccctctgctactcctcaatcc
ggatcatcgagatcaattgacaatcaaaagctgattgatgaatccacaaacagtgcaatt
gatgaaaaccttatcaaaactgcttcaatgatgcctgcagaatctgagtccagagctgct
gtaaaacgatcagtggccgctggatccctttcaaaaccgtctaaacaagaactagcaaaa
gatgatggtaaatctggaatgaccattggcagaactcctggttcttccactactgaccga
gatccccactcacaccccgcagagggcaggcaaggtgtggcagttaatgtttccactgct
gtttcagccaatggtaacacaggttcagtctcaatctcagtcaagggaatttcatctaca
agaacatcgctagatacccatggcagtgaattaaaagtggagagtggagctgccaggtct
tgtgatttgagggtttctactgcaaaagatgatggcactgaagatattccaaggtcatcc
tcttcgcgatctattcattctcccagacatgataataacgtaactgcttcaaagaccagc
gacaaacagtcgaagagaattagttctactgaagagcctgatagattaaataaacgtcgg
aaaggggacactgaagtgagagattcagatgctgatgttcgatttcctgatagggagaga
cccatggatcctcgattggtggacaggattcatcctgctgatattgaaaaatcgggaagt
gatgagcaaggtattaataaggtaatagataaacatttggataggtcaaaagacaaaggc
attgaaagacatgacagggattatagagaacggttggaacgttctgataaatcccgcggg
gatgatcttctggttgagaagtccagagataggtcgcttgaaagatatggaagagaacgt
tctgttgaaagagtgcaagagagaggtagtgagaggagctttgataagctcactgaaaga
ggtaaggatgaaaggaacaaagatgacagaagcaaactccgttatagtgaaacagaaaaa
tctcatcttgacgatcggttccatggtcagagcttgcctcctccgccacctttgcctcct
aatcttgtcccacagtctgtcaatgctggtagaagagatgaagatgccgatagaaggttt
ggaactgccagacatactcaaaggctttctccaagacatgaagagaaagaaaggagacga
tctgaggagaattccttagtttcacaggatgatgcaaaacgtagaagagatgatgacttt
cgtgatagaaagcgggatgaacgagagggcctttcaatgaaggtggaggagagggatagg
gatagagatagggagaaagtgaacctgctgaaggaggaaatggatgctagtgcagcctcc
aagaggaggaaacttaaaagggagcatatgccatctggggaactaggtgagtactcacca
gctctgccacctcccacccttgctattggtatgtcacattcatatgatggaagagaaagg
ggagaccgcaaggggggcatggttcagcgtgctggttacttggaggaacctggcttgagg
atacatggtaaagaagttgccggaaagatgacccgtcgtgatgctgacccgatgtacgac
agagaatgggatgaggacaagaggcagagagttgaacccaagcggaggcatcggaagtga
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integrated database retrieval system
