Malania oleifera: 131153379
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Entry
131153379 CDS
T09312
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mof
Malania oleifera
Pathway
mof04120
Ubiquitin mediated proteolysis
mof04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131153379
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131153379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mof04121
]
131153379
Enzymes [BR:
mof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131153379
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131153379
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131153379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
zf-C3HC4_2
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
EIF3I
zf-C3HC4
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_EML
Beta-prop_CAF1B_HIR1
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
Beta-prop_WDR75_1st
zf-RING_5
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
DUF1664
U-box
RING_XB3-XBAT31
zf-RING_10
WDR90_beta-prop_4th
zf-rbx1
Baculo_p24
zf-Nse
Motif
Other DBs
NCBI-GeneID:
131153379
NCBI-ProteinID:
XP_057961632
LinkDB
All DBs
Position
4:1760091..1788929
Genome browser
AA seq
691 aa
AA seq
DB search
MGESSVGALVPSVKAEPAPSSAAEPPLLLSPSAAAAEEEAEVEVEVEAEAAELRESGAAD
SDSDFLCPICMQFIKDAFLTACGHSFCYMCIFTHLRNKSDCPSCGHFLTSNQIFPNFLLN
KLVKKTSAQQIAKASTPFERLRQALQQGCEVLVKELDGLLSLLTDKKKKMEQEEAEANLQ
ILHEFLRGLRKQKLEELHEIQTDLQYIKEDINAVERHRIDLYRARERYSVKLRMLVDEPA
AAKTWPLPIDKCTSGIISNAHSIQGWTVSSNLQNKKPDVKAQANSQGLQKKDAYFGSDSL
VTQSGQAVARKRQVHAQFNDLQECYLQKRRHCSRQSHKQEEKDSTPVRREGYHAGLEEFQ
SVLTTFTRYSRLRVIAELRHGDLFHSVNIVSSIEFDRDDELFATAGVSRRIKVFEFSTVV
NEPADLHCPIIEMSTRSKLSCLSWNKHTKNYIASSDYEGIVTVWDVTTRQSVMEYEEHEK
RAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICSVKYNPGSSIYVAVG
SADHHIHYYDLRNISQPLHVFSGHRKTVSYVKFLSSSELASASTDSTLRLWDVKENLPLR
TFRGHTNEKNFVGLSVNSEYIACGSETNEVFVYHKAISKPAAWHRFGSSDVDDTNDDLGS
YFISAVCWKSDSPTMLTANSQGTIKVLAQAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgggggagagctcagtgggcgcactggtgccgtccgtgaaagcggagcccgccccgtcc
tcggccgcggagcctccgctgctgttatctccgtcggcggcggcggcggaggaggaggct
gaagtagaagtagaagtagaagcggaagcggcagagctgcgagagagtggagcggctgac
tcggacagcgactttctgtgtccgatatgcatgcagttcatcaaagacgcgtttctaacg
gcctgcggccacagcttctgttacatgtgcatcttcactcatcttcgcaacaagagcgat
tgtccctcctgcggtcatttcctcaccagcaaccagatcttccctaattttctcctcaat
aagttagtgaagaagacttctgctcagcagatagcaaaagcatcaactccatttgagcga
cttcgtcaagcattacagcagggttgtgaagttttggttaaggagctagatggcttgttg
tctctccttacagataagaagaaaaaaatggagcaagaagaagctgaggcaaatttgcaa
attttgcatgaattcttgcgtggtttaaggaagcaaaagcttgaagagctccacgagata
caaactgatctccaatacattaaggaggatataaatgctgtagagaggcatagaatagat
ttgtatcgagcgagggagagatactctgtgaaattgaggatgcttgttgatgaacctgct
gcagcaaaaacatggcccttgccaatcgacaagtgtaccagtggcattatttctaatgca
cacagcatacaaggctggacggtttcaagcaatttgcagaacaagaagcctgatgtaaag
gctcaagcaaattctcagggactccagaaaaaggatgcttactttggttcagattcactt
gttactcagtcaggacaggctgttgcaagaaaaagacaggttcatgctcagttcaatgat
ctacaagagtgttatttgcaaaaacggcggcattgtagcagacaatctcataaacaggaa
gaaaaggattccacacctgttaggagagaaggatatcatgcaggtcttgaggaattccaa
tctgtgctaacaactttcacacgatatagtcggctgagggtcattgcagaacttaggcat
ggggatctttttcattctgtcaatattgtttcaagtatagaatttgatcgtgatgatgag
ttgtttgcaacagctggagtttcacgacgaatcaaggtttttgagttttccacggtggtc
aatgaacctgctgatctgcattgtcccattatcgaaatgtccacgcgatccaagctgagt
tgcttgagttggaataagcacacaaaaaactatattgctagtagtgattatgaggggatc
gtaactgtttgggatgtaactactcgtcagagtgtgatggaatacgaggagcatgaaaaa
cgagcatggagtgttgatttttcacgcacagaaccttcaatgctggtatcaggcagtgat
gattgcaaggtcaaagtttggtgcacaaagcaggaagcaagtgttctcaatattgacatg
aaagctaatatttgttctgttaaatataatccgggatctagcatttatgtggcggtgggt
tctgcggatcatcatatccattattatgatctcagaaatatcagccaaccactgcacgtg
ttcagtgggcatagaaaaactgtttcatatgtaaaattcttatctagcagtgagcttgct
tctgcttccactgacagcacattgcgcttatgggatgtaaaggaaaatttgccattgcgc
acatttagaggccacacaaatgagaagaattttgtgggtctctcagttaacagtgagtac
attgcttgtggcagtgaaaccaatgaagtttttgtttatcacaaggcaatctcgaaacct
gcagcatggcataggtttggatcatcagatgtggatgatacaaatgatgatttaggatca
tacttcatcagtgctgtgtgttggaagagtgatagcccgacaatgttaactgccaacagt
caaggaacaatcaaagtgcttgcacaagcagcttga
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