Malania oleifera: 131153559
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Entry
131153559 CDS
T09312
Name
(RefSeq) uncharacterized protein LOC131153559
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131153559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131153559
03041 Spliceosome [BR:
mof03041
]
131153559
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131153559
Spliceosome [BR:
mof03041
]
Complex B
Other components
Prp19-related factors
131153559
Complex C
131153559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_15
NRDE-2
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
131153559
NCBI-ProteinID:
XP_057961930
LinkDB
All DBs
Position
4:16530378..16558954
Genome browser
AA seq
924 aa
AA seq
DB search
MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARSESPFKKRAVIYERALKALPGSY
KLWYAYLRERLELVRNLPVTHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTEQKLLTR
TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGVPIETSLRVYRRYLKYDPSHIEDFIEFL
VNSSLWQEAAERLAGVLNDDTFFSIKGKTKHRLWLELCDLLTRHATEVLGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRNLPEKARDIFEEGMTTVVTVRDFSVIFDAYSQFEESML
AYKMENVDESDEEEEDGREEIDGDEVEDIRLDVKLSVAEFEKKILLGFWLHAFNDVDLRL
GRLEHLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAV
GKPHTLWVAFAKLYENHKDISNARVIFDKAVQVNYKAVDNLASVWCEWAEMELRHKNFKG
ALELMRRATAVPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTRAVYE
RILDLRIATPQIIINYSLLLEENKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRY
GKAKLERARELFEHAVETAPAEAVKPLYLQYAKFEEDYGLAKRAMKVYDLATKAVPVNEK
LSMYEIYIARAAEIFGVPKTREIYEQAIQSGLPDKDVKTMCMKYAELEKSLGEIDRARGI
YVYASQFADPRSDTDLWNEWHDFEVQHGNEDTFREMLRIKRSVTASYSQTHFILPEYLMQ
KESKMNYDEALDKLKAAGVPEDEMAALERQLAPADDNADDNAAAAKDGSRKVGFVSAGVE
SQADGVRKVSANLEDIELPEESESDEDEKVEIMQKDVPSAVFGGLARKREETEDGDGEDG
AAVDGKNGDSHLGALERIKRQRRA
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatctcccaggacttgtaccccagccaagatgacctcctctacgaagaagagctc
cttcgtaaccccttcagcctcaagctatggtggcggtacctgatcgctcgcagcgagtct
ccctttaagaaacgcgcagtcatatacgagcgagccctcaaagcccttcccggaagctac
aagctctggtatgcctacctgcgcgaacgcctcgagctggtccgaaaccttcccgtcacg
cactcgcagtacgaaaccttgaacaatacattcgagcgagcgttggtaacaatgcacaag
atgccccgcatttggattatgtacctccaaaccctgacggagcagaaattgctcactcgg
actcgccggaccttcgatcgagccctctgtgcgctgcccgtgacccagcacgatcggatt
tgggaaccttacctcgtgttcgtaagccaaaagggcgtcccaatcgagacttctcttcgg
gtttatcggcggtacttgaagtatgacccgtctcacattgaggattttatcgagtttctt
gtaaactctagcctttggcaggaagcggcggagaggttggcgggggtgttgaatgacgat
acttttttctcaataaagggcaagacaaagcataggctctggttggagctctgtgatctg
ctaacgcggcatgccaccgaggttttggggttgaatgtggatgcaataatccgtggtggg
attaggaaattcacggatgaagtgggtaggctttggacttcattagcagattactatatt
agaaggaatctgccggagaaggcaagagatatatttgaagagggcatgacgactgtggtg
accgtgagggattttagtgtgatttttgatgcatactcgcagtttgaagagagtatgctg
gcgtataaaatggagaatgtggatgagagtgacgaggaggaagaagatggcagggaagaa
attgatggggacgaggttgaggatattcgtttggacgtgaagctttcagtggctgagttt
gagaagaagattcttcttgggttttggttacatgcattcaatgatgttgatttgaggttg
ggtcggttggaacacctcatggatagaaggccagaactggccaacagtgtactcctccga
caaaaccctcataatgttgagcagtggcatagacgagtgaagctgttcgaaggtaatccg
acaaaacagatactcacttatactgaggctgtgaggacagttgatcccatgaaggcagtg
ggaaaacctcatactttgtgggtcgcttttgcaaagctttatgagaaccataaagacatt
tcgaatgccagagtgatttttgacaaggctgtgcaagtcaattacaaggcagtggataat
ctggctagcgtttggtgtgaatgggcagagatggaattgaggcacaagaattttaaaggg
gcattggagttgatgaggcgtgctacagctgtgccatcagtagaggtcaaacgtagagtt
gctgctgatggcaatgaacctgtgcagatgaagttgcacaagtctttgagactttggacc
ttttatgttgacttggaggagagcttgggtacattggagtctactcgtgcagtttatgaa
cggatattggacttaagaatagccacgccacaaattataataaactattcattgcttttg
gaggaaaataagtactttgaggatgcatttaaggtttatgaaagaggagtaaagatattc
aaatacccacatgtaaaagatatatgggttacttatctctctaaatttgttaaaagatac
gggaaagcgaaattggaacgagcaagagagttgtttgagcatgctgttgaaacggctcct
gctgaggccgtgaagcctctgtatctacagtacgccaaatttgaggaagattatggtctg
gcaaaacgtgccatgaaagtttatgatctggctacaaaggctgttccagtcaatgagaaa
ctgagcatgtacgaaatctacatagctcgtgctgctgaaatttttggtgtgccaaaaaca
agggaaatttatgagcaagcaatacagtctggtcttccagacaaagatgtgaagaccatg
tgcatgaagtatgcagagctagagaaaagcttgggagaaattgaccgagcacgtggaata
tatgtatatgcctctcaatttgcagatccacgctctgacactgatttatggaatgaatgg
catgattttgaggttcagcatggaaatgaggacacctttagggaaatgctccgcatcaaa
cggagtgttactgctagctatagccagacacatttcattctcccggaatatttgatgcaa
aaggagtcaaagatgaactacgatgaggcattggataagttgaaggcagctggagttcct
gaagatgaaatggctgccttagaaaggcagttagcacctgcagatgacaatgctgatgac
aatgctgctgccgctaaagatggcagtagaaaagtgggctttgtgagcgctggggtggaa
tcacaagctgatggggtgcgaaaagtctctgcaaatcttgaagatattgagctaccggaa
gaaagtgaatcggatgaagatgaaaaagttgagatcatgcaaaaggatgtgccatctgct
gtttttggaggtttggccaggaagagggaagagactgaagatggagatggggaagatggt
gctgctgtggatggtaaaaatggcgatagccatcttggggcccttgagaggataaaaagg
caaagacgagcctga
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