Malania oleifera: 131153970
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Entry
131153970 CDS
T09312
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mof03036
]
131153970
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
131153970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
PDS5
PHD_2
Cnd1
zf-PHD-like
zf-RING_2
YfjL_C
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
131153970
NCBI-ProteinID:
XP_057962400
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All DBs
Position
1:98829977..98890232
Genome browser
AA seq
1793 aa
AA seq
DB search
MSAPSGSSLRGTTLSNTVHSEVAPCLPLPSLPVFCGAFDQQLRLFDEPRSLNRNEVLAQA
SKIADLLRDTDVSYLNLRDDATSLPHGFREPLDLYNEVLCYNSQAFEYITPGPIKEQITN
SAVSEKKPSERNVPVTGQAQKDHGGSLNHQFDHVIVNDTVASSSRKVKLKKKGTSDVSSS
IEQDPSELQGCLTDATIGRFCEVLEDFCSRAEVPSDDRDEAEWLSLPISDLRMLVNEVMT
IRAKKILHFVPVDFLVRLLKVLDHQIHHAEGLSVDECEHSDSDVVSSIFCALESIHAAIA
VMAHNEMPKQLYKEEVIERILEFSRHQIMDVMCACDPSYRALHKPRENGVLEGDDDEEAD
ADFGSASKRRRTVRSVKVKKSAANKVSAAVNSILQKLCTILGFLKDLLLIERLSDSCILQ
LVKTCFTTFLVDNVQLLQLKAITLISAIFSSYKQHRTHVMDEALQLLWKIPSSKRVLRAY
HLPDEEQRQIQMVTALLIQLVHCSANLPESFGQASNGSLILEVSIDASYVTKCHEAVTEA
CCLFWSRVLQRFTTVKSQDASELKVMMENLVMDLLTTLNLPEYPASAPILEVLCVLLLQN
AGLKSKDISARSMAIDILGTIAARLKHDAVLCSRDDFWIIQELVGGDNVDSSYSKDACSI
CLSGRGESSLLVCQGCQRLFHAECLGIREHEMPVRGWDCQFCQSRKQLLVLHAYCKTQCK
DDGKKNTSSLKKTSEATDSIAKVEIVQQMLLNYLQDAGSVDDVHLFARWFYLCLWYKDDP
ESQQKFMYYLARLKSKAIVRDSGAVSSLLTRNSVKKITLALGQKSSFSRGFDKILFMLLA
SLRENSPVIRAKALRAVSIIVEADPEVLCEKRVQLAVEGRFCDSAISVREAALELVGRHI
ASHPDVGLKYFEKVAERIKDTGVSVRKRAIKIIRDMCTSNANFSEFTNACIEIISRVSDD
EASIQDLVCKTFYEFWFEEPSGSQTQFFGDGSSVPLEVAKRTEQIVEVLKKMPSHQLLVT
VIKRNLALDFFPQSAKAVGINPILLASVRKRCELMCKCLLEKILQVEEMNSEEVEVRTLP
YVLVLHAFCVVDPTLCAPASDPSQFVVTLQPYLKSQVDNRAVAQLLESIIFIIDAVLPLL
RKLPQSVVEELEQDLKHMIVRHSFLTVVHACIKCLCSVSKVAGKGSSVVEYLIQVFFKRL
DALGLGLDNKQQVGRSLFCLGLLIRYGNSLMNASSSSNKNLDVICCLSLFKKYLRVEDFV
IKVRSLQALGFVLIARPEYMLEKDIGKILEATLSSDCDCRLKMQALQNMYEYLLDAEVQM
GIEMASDNDVHYSVEGGRSVPVAAGAGDTNICGGIVQLYWDRILGRCLDVNDQVRQSALK
IVEIVLRQGLVHPITCVPYLIALETDTQEVNSKLAHHLLMNMNEKYPTFFESRLGDGLQM
SFIFIQSLSSTPENANQKSQSKIIGNIKGKADGASFSFARLGVSRIYKLIRGNRVSRNKF
MSSVVRKFDSPSWNDLVIPFLMYCVEILALLPFTSPDEPLYLIYAINRVIQVRAGPLEAN
MKAWSSHQLQRHSQNVSHENGNIQQEVSARSINYTVPVDANGTVQQSVGEPMSNYATSVD
SNIHPMSLDGSCGNLKDDLQKIQADCLAATALQLLLKLKRHLKIVYSLNDARCQAFSPNE
PLKPGEVLSRQNIPFNISDTRVNLPTTYEEFIQRYQEFKHALKEDTIDYSTYTANIKKKR
PPPKRVGKSGGRVTGEGEDDDDDDEDFTAGTSFQRLSNIGRKVGITRASRQRM
NT seq
5382 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccccgagcggttcgagcctccgaggcaccacgctctcgaacacggtccactcc
gaggttgcgccgtgcctaccgctgccctcgctccctgtgttctgcggggcattcgatcag
caactccggttgttcgatgagccgaggtcattgaatcgaaatgaggttcttgctcaggcc
agcaagattgctgatctgcttcgcgacaccgatgtttcgtacctgaatcttagggatgat
gcaacctctcttcctcatggttttcgagagcctttagacctgtacaatgaagttctctgt
tacaattctcaggcatttgagtatattactccaggtcccatcaaggagcagatcaccaat
agtgctgtttctgaaaagaagccctctgagcggaatgtacctgttactgggcaagcccaa
aaagaccatggaggaagccttaatcatcaatttgaccatgtcattgttaatgacacagtt
gcctcttcttctagaaaagtaaagttgaagaagaaaggaactagtgacgtttcatcttcc
attgaacaagatccctctgagcttcagggttgcctcactgatgccaccattggacgtttt
tgtgaggtgctggaggacttctgtagcagagcagaagttcctagtgacgatcgggatgag
gcagagtggttgtcattgcccatatctgatcttagaatgcttgtaaatgaagtaatgact
atccgtgcaaaaaaaattctacattttgttcctgtagattttcttgtaagactgttaaag
gttttagatcaccagattcatcatgcagaaggtttatcagtagatgaatgtgaacattca
gattcagatgtagtttcatcaattttttgcgccttggagtccattcatgcagctatagcg
gtaatggctcataatgaaatgccaaagcagctctataaggaggaggtcattgaaagaata
ttggagttctctaggcatcagatcatggacgttatgtgtgcttgtgatccatcataccgg
gccttgcataaaccacgtgaaaatggggtattagagggtgatgatgatgaagaagctgat
gctgattttggttctgcaagcaaaagacgacgtactgttaggagtgttaaagttaaaaaa
tctgcagcaaacaaggtttctgctgctgtgaactctatacttcagaaattgtgcactatt
cttggttttctcaaagacttgttattgatagagcgcctatcagatagttgcattctgcaa
ctggtgaagacatgcttcacaacattcttggtggataatgtccagcttttgcaattgaaa
gcaatcactttgattagtgcgatattctcttcatacaaacagcatcgtactcatgtgatg
gatgaagcacttcagttgctttggaagataccatcctcaaagcgcgtgctaagagcctat
cacctacctgatgaagagcagaggcagattcagatggtcactgctttgcttattcaattg
gttcactgtagtgccaaccttcctgaatcttttgggcaagcatctaatggcagtctcata
ttagaagtctcaattgatgctagttatgtgaccaaatgccatgaagcagtcacagaggca
tgttgccttttctggagtcgtgttcttcagcgatttacaactgtaaaatctcaggatgcc
tctgaattaaaagttatgatggagaatcttgtcatggatttactgacaactttgaatttg
ccggaatatcctgcttctgctcctattctggaggttctttgtgtattactgctccagaat
gctgggctgaaatctaaagacatttctgcacgatccatggccatcgacattcttggaact
attgctgctaggttgaagcatgatgctgtgctttgcagcagagatgatttttggattata
caggagttagttggtggagacaacgttgattctagttattcaaaagatgcatgctcaatt
tgtttgagcggacgaggtgaaagctcacttcttgtatgtcaaggttgtcagagattgttc
catgcagagtgcttgggaatcagagaacatgaaatgcctgtccgtggttgggattgtcag
ttttgccaatccaggaagcaacttcttgtattacatgcatattgcaagacacagtgcaaa
gatgatgggaaaaagaatacctcttcattaaaaaagacttctgaagctactgactcaatt
gcgaaagttgaaattgttcaacagatgcttttgaattacctccaggatgctggttctgtg
gatgacgtgcatctttttgctcgctggttttatctttgtctatggtacaaagatgatccg
gaatcacagcagaagtttatgtactaccttgctagactgaaatcaaaagccattgtgcgt
gactcgggggcagtttcttcattgctgacacggaattcagtcaagaagataactttagca
ttagggcaaaaaagttctttctccagaggatttgataagattctttttatgcttctggca
agtttaagggagaactctcctgtaatacgtgcaaaggcattgcgtgcggttagtattatt
gtggaagctgatccagaggttctttgtgaaaaacgtgtccaactggccgtggaaggaaga
ttttgtgattctgcaatatctgtaagagaagcagcactggagcttgttggtaggcatatt
gcttcccatcctgatgttggtctgaagtattttgagaaggttgcagagaggataaaggat
actggagtgagtgttcggaaacgagccattaaaatcatccgagatatgtgcacttccaat
gctaacttctcagaatttaccaatgcttgcattgagattatttctcgtgtcagtgatgat
gaagctagcattcaggaccttgtttgcaagacattttatgagttttggtttgaggagcct
tctggttcgcagactcaattttttggagatggcagttctgttccattggaagtggcaaaa
aggacagagcagattgttgaggtgttgaagaagatgccaagtcatcaacttcttgtcact
gttatcaagcgcaacttagctctcgacttttttccacagtcagctaaagctgttggtatc
aaccctatcttactggcatcagtacgtaagcgctgtgaattaatgtgcaaatgcttactg
gaaaagatattgcaggtagaggaaatgaatagtgaggaagtcgaggtgcgcactcttcct
tatgttctggtcttgcatgctttttgtgttgtggatccaacgctgtgtgccccggcctct
gatccctcccagtttgttgtcaccttacagccatatctgaaaagtcaggttgataatcgt
gcagtggcacagcttctggagagtattatttttataattgatgctgttctacccttgttg
cgaaagcttcctcagagtgtagttgaagaacttgagcaagaccttaagcacatgattgtg
cggcattcttttctgacagttgtccatgcttgcatcaagtgcctttgctcggtgagcaaa
gtagccggaaaaggttcaagtgtagtcgagtatcttatccaggtcttcttcaaacgtttg
gatgccctgggcttagggcttgacaacaagcagcaagtggggcggtctcttttttgcctt
gggttgcttatacgctatggtaattctttgatgaatgcctccagctccagtaacaaaaat
ttagatgttatatgctgtctcagcttgtttaagaaatatctccgtgtggaggattttgtt
ataaaagttagatctttgcaggcattgggttttgttttaattgcaagaccggaatatatg
ttggaaaaagatattgggaaaatattagaggcaacactgtcttccgattgtgattgtcgt
cttaagatgcaagcattgcaaaacatgtatgaatatcttcttgatgctgaagttcaaatg
ggaattgaaatggctagtgacaatgatgttcattattcggtagaaggtggccgcagtgtg
cctgttgctgcaggtgctggtgatactaacatctgtggtggaatagttcagttgtattgg
gatcgtatcttggggagatgtttggatgtcaatgatcaagttcgtcagtctgcccttaag
attgtggaaattgtgctacgtcaaggtcttgttcaccctattacttgtgtaccatatctt
atagcacttgaaacagatacccaggaggtgaactcaaagttggctcatcatttgctgatg
aatatgaatgagaagtatcccactttttttgaaagtcgtttgggtgatggtcttcagatg
tcttttatctttatacagtctttgagtagcactcctgaaaatgcaaaccaaaagtcccaa
tccaaaataattggaaatataaaaggaaaagcagatggagcctcattctcttttgcaagg
cttggagtgtctcgaatctacaaactcattcgtggaaaccgtgtttctaggaacaaattt
atgtcctcggttgttcgtaaatttgattctccaagctggaatgatttagtaattccattt
ctgatgtactgtgtagaaatacttgccttgctccctttcacatcacctgatgagcctctt
tatttgatttatgccataaatcgagttatccaagttagggcaggaccacttgaggctaac
atgaaagcctggagctcacaccaactacagagacattcacaaaatgtatctcatgaaaat
ggaaacattcaacaggaggtgtctgctcgtagtattaattacacagttccagttgatgcg
aatgggacagtacaacagtcagtgggtgagcctatgtctaattacgctacatcagtggat
tcaaatattcatcctatgagcttagatggttcttgtggtaacctaaaagatgatctacag
aaaatccaggctgactgtcttgcggctacagcactgcaactcctcctgaagctaaaacgg
cacctgaaaattgtttatagcctaaatgatgctaggtgccaggctttttctccgaatgaa
cccctaaaacctggggaggttctctcaaggcagaacattccctttaacatcagtgacaca
cgtgttaatttgccaacaacttatgaagaatttatacaaagatatcaggaatttaaacat
gcgttgaaggaagacacaattgactactcaacctacacagcaaacatcaagaagaagcgt
cctcccccaaaaagagttgggaagtctggcggccgcgtgactggtgaaggcgaagatgac
gatgacgatgatgaagattttacagccggcaccagcttccagcggttgagtaatattggc
aggaaagtcggcatcactagagccagcaggcaacgaatgtag
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integrated database retrieval system
