Malania oleifera: 131154408
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Entry
131154408 CDS
T09312
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131154408
09123 Folding, sorting and degradation
03018 RNA degradation
131154408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131154408
03041 Spliceosome [BR:
mof03041
]
131154408
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131154408
mRNA degradation factors
5'-3' decay
Lsm complex
131154408
Spliceosome [BR:
mof03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131154408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
131154408
NCBI-ProteinID:
XP_057963143
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Position
4:123720848..123744140
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaggaaagaaacagttttggatctggcaaagtttgtcgataagggtgtacaa
gtcaagctcacaggcggaagacaggtaacaggcactctaaaggggtatgatcagttattg
aaccttgtcttggatgaagctgtagagtttctaagagacccagatgatccactgaagacc
actgaccaaaccaggcgtcttggcctaatagtttgtaggggaactgcagtgatgcttgtg
tcaccgactgatggtaccgatgagattgccaacccatttgtccagccagatggggcctaa
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