Malania oleifera: 131154590
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Entry
131154590 CDS
T09312
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131154590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131154590
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
131154590
Spliceosome [BR:
mof03041
]
Complex C
Other components
Step II factors
131154590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
Cas3-like_C_2
Flavi_DEAD
nSTAND3
AAA_30
TsaE
Sigma54_activ_2
AAA_16
ABC_tran
SLFN-g3_helicase
PhoH
Motif
Other DBs
NCBI-GeneID:
131154590
NCBI-ProteinID:
XP_057963478
LinkDB
All DBs
Position
4:complement(16219112..16229858)
Genome browser
AA seq
1168 aa
AA seq
DB search
MAPEAQDAGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITDMGQTCETVDKFDSKLKE
NGAEMPDYFVRTLLTIIHAILPSKSKSEKDLKNEVSSEGRKPKFPGLAIQDSKERIKQLE
REIESKTRSHHRDTKGKEEGRRDRGTGRDRDRDRDRDRDGRHSHRDRDEDDRRSDYRSRG
RHRDRNDKHRRDEYEDGDENGDGRRGRYQSDEPELYKAYSGRVSRVMDTGCFVQLKELRG
KEGLVHVSQMANRRVGNAKDVVKRDQEVFVKVISVSGQKLSLSMRDVDQDSGKDLLPLKK
SLEDDGFRTNPSRLNQGPTMRTGLSGIRIVEEDDAAPSRRPLKRMSSPEKWEAKQLIASG
VLDVRDCPMYDEESDGMLYQEEGAEEELEIELNEDEPAFLQGQSRYSVDMSPVKIFKNPE
GSLSRAAALQSALIKERREVQEQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVG
LSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGET
GSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVTEEFGCRLGEEVGYAIRFED
CTGPDTVIKYMTEGMLLREILVDENLSQYSVVMLDEAHERTIHTDVLFGLLKQLVKRRPD
LRLIVMSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVVQIHLT
EPEGDILLFLTGQEEIDHACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPP
GKRKVVVATNIAEASLTIDGIFHVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGR
AGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGHSTLTMKAMGINDLLSLDFMDPPS
PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPMDPPLSKMLLASVELGCSDEILTIIA
MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHMTLLAVYEAWKAKNFSGPWCFENFVQSR
SLRRAQDVRKQLLSIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVEN
QPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMS
KQKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggaggcccaagacgcaggtctgaagaagctggagtacctctctctcgtctca
aaggtgtgttccgagctagaaacgcatttagggttcggagacaaggtgttggcggagttc
atcaccgacatgggccaaacgtgcgagactgtcgacaaatttgattccaaattgaaggag
aacggcgcagagatgcccgactacttcgtacggactttgctgaccataattcacgcaatc
cttccgtcgaaatcgaagtccgaaaaggacttgaaaaatgaggtatcctcggagggtaga
aagccgaagtttccagggttagcgattcaagacagtaaagagagaataaagcagctcgag
agagagatcgaatctaagactcgttctcatcatagagacacgaaaggaaaggaagaaggt
agacgagacagaggtacaggcagagacagagatagggatagggacagagatagagacgga
cggcacagtcatagagatagggatgaagatgacagaagaagtgattacaggagtagaggg
aggcacagggatcgcaatgataagcataggagggatgagtacgaggatggggatgagaat
ggggatggtagaagaggtaggtatcagtcggatgagcctgaactgtacaaggcttatagt
gggagggtttcgagggttatggacacaggatgcttcgtgcagctgaaggaacttaggggg
aaggagggtctggtgcatgtgtcacagatggcaaatcggagggttgggaatgccaaagat
gttgtgaagcgggatcaggaggtctttgttaaggtgatatcagtgtcggggcagaaactg
agtctttcaatgagggatgttgatcaggatagtgggaaggatttgcttccattgaagaag
agtttggaggatgatggatttaggacaaacccttcgagattgaaccaggggccaaccatg
aggacggggctttcagggatcaggattgtggaggaggatgatgctgccccgtctcggcga
ccactgaaacgaatgagttctccggagaaatgggaagcaaagcagttgattgcttcagga
gttttagatgtcagggattgccccatgtatgatgaggaaagtgacggcatgctttatcaa
gaagagggtgcagaggaagagcttgagattgagcttaatgaagacgagcctgcattcttg
caaggccaaagtcggtactctgtggatatgtcgcctgttaaaattttcaagaatccagag
gggtctttgagtcgagctgctgcccttcagtctgctctcataaaggagaggagagaagtt
caggaacagcagcagcggacaatgcttgattccatcccaaaagatctcaatcgtccttgg
gaagacccaatgccagagacaggtgagaggcatcttgcgcaggagcttagaggtgttggt
ttatcagcatacgacatgcctgaatggaagaaggatgcttttggaaaagccctaacattt
gggcagaggtcgaagctttcaatccaggaacagaggcagagcctgcccatttataaattg
aaaaaagaattggtccaggctgttcatgataatcaagtacttgtagttatcggggagact
ggttcgggcaagactactcaggtgacacaatatctagccgaagcaggttacactacgagg
ggtaagattggatgcactcagcctcgtagggtggctgcaatgtccgtggccaagagggtc
acagaagagtttgggtgtcgcttaggagaggaggttggatatgcaattcgatttgaggat
tgtactgggcctgacactgtgatcaagtatatgactgagggtatgcttcttagagagatt
ctggtagatgaaaacctttcgcaatactctgtggtcatgcttgatgaagcgcatgagaga
actatccacactgatgttctttttggtttgctgaagcagcttgtcaaacggagacctgac
cttcgtttgatcgtcatgtctgctacattggatgctgagaaattctcagggtatttcttt
aactgcaatatctttaccattcctggaagaacttttcctgttgagatactttacactaag
cagccagaaagcgactatctggatgcagccttgatcaccgtagtacagatccatttgact
gaacctgaaggcgacatcctccttttcttgactggtcaggaggagattgatcatgcatgc
cagtctctttatgagaggatgaaagggctgggtaaaaatgtgcctgaattgattattttg
ccagtctatagtgcccttcctagtgaaatgcaatcaaggatttttgagcctgcccctcct
ggaaagaggaaagtagttgtggctaccaatattgctgaggcttctttaactattgatggg
atctttcatgtcattgaccctggatttgcaaagcagaatgtatataaccccaaacaagga
cttgattcattggttataactcctatttcgcaagcatcagccaagcaacgagctgggcga
gctgggcgtactgggccaggaaaatgttaccgcctttatacagagagtgcttatcgcaat
gagatgccccccacctcaattccagaaatccagaggataaatcttggacattccacactt
accatgaaagctatggggataaatgatctcttgtcattggatttcatggatccgccttct
cctcaagctctcatttctgccatggaacagctttacagtttaggagctttggatgaggaa
gggcttctgactaaactgggtaggaaaatggctgaatttcccatggatccacctttatct
aagatgcttcttgctagtgtggagcttggatgcagtgatgagattttgaccatcattgca
atgattcagacagggaacatcttttacaggccaagagaaaaacaagcccaagcagatcaa
aagagggccaagttcttccagcccgagggagatcatatgactttactagctgtttatgag
gcgtggaaggcaaagaatttttctgggccatggtgttttgagaactttgtgcagtctcgc
tccttgaggagagcacaagatgtcagaaaacagcttctctccatcatggacaggtataaa
ttggacgttgtgagtgcaggaaagaatttcacaaagataaggaaggctattacagcagga
ttcttctttcatgcggctagaaaagatccacaggagggttatagaaccctagtggagaac
cagcctgtttatattcacccaagcagcgcccttttccagagacaaccagattgggttatc
taccatgagcttgtaatgactacaaaggagtacatgcgtgaggtcactgttattgatccc
aaatggcttgtcgaacttgcaccgagattcttcaaagttgccgatccaacaaaaatgagt
aaacagaagcgtcaagaacgcattgaacctctttatgacagataccatgaacctaattct
tggcgtttgagtaaacgccgtgcttga
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