Malania oleifera: 131154894
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Entry
131154894 CDS
T09312
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mof
Malania oleifera
Pathway
mof03020
RNA polymerase
mof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131154894
09124 Replication and repair
03420 Nucleotide excision repair
131154894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131154894
03400 DNA repair and recombination proteins [BR:
mof03400
]
131154894
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131154894
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131154894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
131154894
NCBI-ProteinID:
XP_057963688
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All DBs
Position
5:complement(18287612..18319487)
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AA seq
318 aa
AA seq
DB search
MEGASYQRFPKVKIREVKDDYMKFELRDTDASMANALRRVMLAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLQARCINDQTLDV
TSKDLYSSDSTVVPVDFSDSSGFDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDMMETLTLEEKRSWVESSPTKVFDIDANTQQVIVVDPEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFLFTVESTGAIKASQLVLNAIEVLKQKLDAVRLSDD
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcgtcgtatcagaggtttccgaaggtgaagatcagagaggtgaaagatgac
tacatgaagttcgagctccgggacaccgacgccagcatggccaacgccctccgtcgcgtc
atgctggcggaggtgcccaccatcgccatagacctggtggaaatcgaggtcaactcctcc
gtcctcaacgacgaattcatcgcccaccgccttggcctcattccccttaccagtgaccgc
gccatgagcatgcgcttttcccgtgactgcgacgcctgcgacggcgacggtcagtgcgag
ttctgctccgtcgagtttcacctccaggcccgctgtattaacgaccagaccctggatgtc
accagcaaagatctctacagctctgattctactgtcgttcctgtcgatttctctgattct
tctggtttcgactcctccgagcagaggggtataataattgtaaagttacgtcgtgggcaa
gaactgagattaagagcgatagccaggaaaggaattgggaaagatcatgcaaaatggtca
cctgctgcaactgtcactttcatgtatgaaccagagatccacatcaatgaggatatgatg
gaaacattgacgctggaggagaaaagaagttgggttgaaagtagccctaccaaagtgttt
gacattgatgctaacacccaacaggtcattgtcgttgatcctgaggcatacacttacgat
gatgaagtgctcaagaaagcagaagctatggggaagcctgggcttgtggagatttatgca
aaagaagactcttttttattcacagttgagtctactggtgcaatcaaagcctctcagttg
gtactcaatgcgatagaagtccttaaacaaaaactagatgctgttcgtctgtcagatgac
actgttgaagctgatgaccaatttggtgagttgggtgcgcatatgagagggggatga
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integrated database retrieval system
