Malania oleifera: 131155145
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Entry
131155145 CDS
T09312
Name
(RefSeq) pre-mRNA-processing factor 39-1 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131155145
Spliceosome [BR:
mof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131155145
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
NRDE-2
TPR_16
Motif
Other DBs
NCBI-GeneID:
131155145
NCBI-ProteinID:
XP_057964060
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All DBs
Position
5:44633117..44666725
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AA seq
842 aa
AA seq
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MGDSETVVAQTSAVVGYTSSGYTSTDFAEAGANVATDAGAFIAGATAEVSPVAPTDAAYA
VADGSVSGDSNTYNSDTNSAVQEAAAVTVYETKQSDGVIDTTESLASLEKMAVESSQADG
YDSSVNGNVVGEAAHYTSAENGNALDVGGDAATTEQQFDGSSAPPMSAEEDRLWSIVRAN
SLDFNAWTALIEETEKMAEDNILRIRKVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVV
EVYERAVLGVTYSVDIWLHYSIFTISTYGDPETIRRLFERGLAYVGTDYLSYPLWDKYIE
YEYSQQEWSRLAMIYTRILENPNQQLDRYFNSFKELAGSRPLSELRTAEEAAAVAGVPSE
VAGQGIEGEVHLDTVEQSSKPVRAGLAEAEELEKYIAIREEMYKKAKEFDSKIIGFETAI
RRPYFHVRPLNVAELENWHNYLDFIERGDEFNKVVKLYERCLIACANYPEYWIRYVLCME
ASRSMDLANNALARATQVFVKRQPEIHLFAARFKEQNRDIEGARAAYQLVHTEISPGLLE
AIIKHANMEHRLGKLENAFLLYEQAIAIEKVKEQSQALPMLFAQYSRFSYLVSGNADKAR
DIVVEAAEHVQLSKPLLEALIHLESILPLPKRIDYLDSLVDKFIVPNPESPNSTTPAERE
EISCIFLEFLDLFGDAETIKKADDRHAKLFLQHRSTSELKKRHAEDYLTSDKAKLAKHYS
GVLSPAQSLMGAYPSAQNQWAAGYGLQPQAWPQVTQAQGQPWNPGYAQQGYNAYSYGSSY
THPQVPTTTPQTAGYGAYPTTYPVQQTFPQQSYAPPATAAAAAAAAAPAQQPVPQAYYGS
YY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtgaaacagtggttgctcaaacatctgctgtggtggggtatacatcgagt
ggctacacttccactgactttgctgaagctggtgcaaatgtggcaactgatgccggtgct
tttattgctggggcaactgcagaggtgtctcctgttgctccaacagatgcggcttatgct
gttgcagatggttctgtttcaggtgattcaaatacatataatagtgacacaaattctgct
gtccaagaagctgctgctgttacagtatatgaaacaaagcagtctgatggagttattgat
accactgagagtcttgctagtcttgagaagatggctgtggagtcgtctcaagctgatggt
tatgattcttctgtaaatggcaatgttgttggtgaagcagctcattacacttcagctgag
aatgggaatgcgctagatgttggtggagatgcagctaccactgagcaacagtttgatggt
agttctgcgcccccaatgtctgctgaggaagatagattgtggagcatagttagggctaat
tctttggattttaatgcatggactgccctcatagaagaaacagagaagatggcagaggac
aacatattgagaatcagaaaagtttacgatgcttttttagcggaatttcctttgtgctat
ggttattggaaaaagtatgctgatcacgaggcacgtcttggttctattgacaaagttgtg
gaggtttacgagcgcgcagttctaggggtgacctattctgtggacatttggttgcattat
tccatatttaccataagcacttatggagatccagagaccattcgaaggctgtttgaacga
ggattagcttatgttggaacagattacctgtcttaccctctttgggataaatatatagaa
tatgaatactcacagcaggagtggtctcgtcttgccatgatctacacaaggattttagag
aacccaaatcaacagctggatcgttatttcaatagcttcaaggaattagctgggagtcgg
cctttgtcagaattgagaactgctgaggaagctgctgctgtggctggtgttccttctgag
gttgctggccaaggaattgagggagaggttcatcttgacaccgtggaacagtcttctaaa
cctgtaagggcaggcttagcagaagcagaggagttggagaagtatatcgctattagagaa
gagatgtacaagaaagctaaagagtttgattctaagataattggttttgaaacagctatc
aggcggccctacttccatgtgcggcccctcaatgttgcagagcttgaaaattggcataac
tatttggattttattgaaaggggggatgaatttaacaaggttgtgaagttatatgaaagg
tgtctgattgcatgtgccaattatccagagtattggattcgatatgttttgtgcatggaa
gccagtagaagtatggatcttgcaaataatgcacttgcacgtgctacccaagtatttgtc
aagaggcaacccgagattcatctttttgctgctcgattcaaagagcaaaatcgggatata
gaaggagctcgagctgcatatcaacttgtgcatactgaaatctcacctggtcttctggaa
gcaattattaagcatgcaaacatggaacatcggctgggaaaattggaaaatgcattcttg
ttatatgagcaggccattgccattgaaaaagtgaaagagcagtcgcaagcattaccgatg
ttgtttgcccagtactcccggttttcgtatttggtatcaggcaatgcagataaagcaagg
gatattgtagttgaagcagctgagcatgtccagttgtctaaaccacttctagaggcacta
atccatctggaatcaattcttccactcccaaaacgaattgattatctagattcattggtt
gataagttcatagtgcccaaccctgaaagcccaaattctacaactcctgctgaaagggag
gagatatcttgcatctttttggagttcttggatctctttggagatgcagaaactatcaag
aaggctgatgacaggcatgctaagctcttcttacagcacaggagtacgtcagaattgaag
aagcgtcatgcggaggattatctaacttcagacaaagcaaagttagccaaacattattct
ggtgttctatcacccgcccagtcattgatgggtgcgtatcctagtgctcaaaatcagtgg
gcagctggttatggtttgcagcctcaggcttggccacaagttacacaagcacaagggcaa
ccttggaatcctgggtatgcccaacagggttacaatgcgtacagttatggaagtagctat
acccacccacaagtacccacaacaacaccacagactgctggttatggtgcttatcccaca
acatatcctgtccagcagacattccctcaacaaagttacgcaccccctgccacagcagcg
gcagcggcggcagctgctgcgccagctcagcaaccagttcctcaggcgtactatgggagc
tattactga
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