Malania oleifera: 131155186
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Entry
131155186 CDS
T09312
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131155186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131155186
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131155186
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131155186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
131155186
NCBI-ProteinID:
XP_057964121
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All DBs
Position
5:91192932..91207392
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AA seq
331 aa
AA seq
DB search
MREVQLSLNQTQKLRVKKALEQLESLSSKINSNASVTVADTISVNYEDGVLKGHGTSELD
GEVVATVCGIVERVNKLVYVRALRARYKPEIGDIIVGRIIEVAPKRWRLEINFSQDAVLM
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQRG
QLLKIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVEAKDDMLEDETNKSEQLST
NANRSGMCLEEQEQNYKSYTPLEIRQNICRTANAVRVLSTLGFNVTMEVIVETVNLSISM
NVDIHEMLGAEFCVVVVEREAERQSFMGKKK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgagagaggtgcaactttcattgaatcaaacgcagaagctcagagtgaagaaagctctg
gaacaactggagtctttgtcttcaaaaatcaattccaatgcttctgtcactgttgcagac
actatctctgttaattatgaagatggcgtcctcaagggacatggaacctcagagcttgat
ggcgaagtggttgcaacagtttgtgggatagttgagcgtgtgaacaagctagtctatgta
cgtgcattacgagccaggtacaaacctgagattggggatataatagtggggcgcatcatt
gaggttgctccaaagcgttggagattggagataaattttagtcaagatgcagttttgatg
ctttcttcaatgaacttgcctgatggtatccagaggcggagaactgcagttgatgagctc
aacatgcgcagcatttttgaagagaatgatgttgtttgtgctgaggttcgcggtttccag
catgatggcagtttacacctgcaagcaagaagtcaaaaatatggaaagctccaacggggt
caactactcaaaattcctccatatctggtgaaaagacgcaaacaacatttccatcaccta
gaacagtatggaattgacttgatacttggttgtaatggattcatatggattggggaacat
gtggaagcaaaagatgatatgttagaagatgaaacaaataaatctgagcaactgagcacc
aacgccaatagaagtggcatgtgtcttgaagaacaagaacaaaattacaaaagttacaca
ccgctagaaataaggcagaacatttgcaggactgcaaatgctgtccgtgtcttgtcaact
ctaggatttaatgttaccatggaagtgatagtggagacggtaaacttgagtatctcaatg
aatgtggatatacacgagatgcttggagcagagttctgtgttgtggttgtagagagagag
gctgaacggcaaagcttcatgggaaagaaaaagtga
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