Malania oleifera: 131155206
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Entry
131155206 CDS
T09312
Name
(RefSeq) exosome complex exonuclease RRP44 homolog A
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131155206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131155206
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
131155206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
PIN_4
OB_Dis3
Rrp44_CSD1
Rrp44_S1
OB_HELZ2
CSD2
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
131155206
NCBI-ProteinID:
XP_057964158
LinkDB
All DBs
Position
1:complement(1016272..1084291)
Genome browser
AA seq
935 aa
AA seq
DB search
MLQSKSFVKKTRHGKVLKVVREHYLRDDIYCGSSICKVCDSSSARLSPNGSPLLIVDTNV
VLNQIDLLENPAIDDVVVLSVVLEEVKNKNRAIYDRVRALCNNSLRKFFVFSNEHHKDTY
VKGMDGESPNDRNDRAIRVAAQWYQSHLGSGMRVLLITNDRENKRKATEEGISAETVESY
VKSLGKPDLLDLLVRPVSQDVDMETVEDLRPSKRKVIYIEHKPISEITSGLLCGIYHQGK
LRVNRYNPFEAYVGSESIGDEIIIYGRGNMNRAFDGDVVAVELLPQDQWHEEKSLSIADE
EDEEEEDVHLAPSSADDAPRNTNLVQGGSRETNPVSCRPSGRVVGVIKRNWHSYCGSLEP
MPLPAGNGGVAHALFVSKDRRIPKIRIQTRQLGNLLDKRIIVAVDSWDCQSRYPSGHYVR
TVGQIGDRETESEVVLIENDINSRPFSSQVLACLPPLPWSVSSEDLASPIRQDLRHLHVF
SVDPPGCKDIDDALHCTALPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERR
IDMLPKPLTEDICSLRSDVERLAFSVVWEMTPEAEIISTRYTKSIIKSCAALSYIEAQAR
MDDSRLMDPLTIDLRNMNALAKIMRLRRIDRGALTLASAEVKFEIDTETHDLLDIGMYQI
REANQMVEEFMLAANVSVAEKILKHYPLCSLLRRHPSPTREMLEPLLQTATAVGLNLDIS
SSKSLADSLDNAVGDDPYFNKMIRILATRCMTQAVYFCSGDLSPPEFHHYGLASPLYTHF
TSPIRRYADVIVHRLLAASLGIYKLPAIFQDRPQLTNIADNLNYRHRNAQMASRSSVELH
TVIHFRNRPTDTEARIVKIRSNGFIVFVPKFGIEGPVYLAARTENAGGEWVVDEQQQKVK
KRDGSIFYGVLQMVRIHMEVVEPQPNRPKLQLTLI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgttgcagagtaaatccttcgttaagaaaacgaggcacggtaaagtactaaaggttgtt
agggagcactatctcagggacgacatctactgcgggtcttccatttgcaaagtctgcgac
tcttcctctgctcgcctcagtccgaatggatcccctcttctcattgtcgacactaatgtt
gttctcaaccagattgatttgctcgaaaatccggcaattgacgacgtcgttgttctatcc
gtggtgttggaagaggtcaagaataagaacagagccatttacgacagagtcagagccctc
tgcaacaattctcttcggaaattcttcgttttctcgaatgagcaccacaaggatacatat
gtcaaaggcatggatggagaaagtccaaatgatcggaatgatagagcgattcgggtggca
gctcagtggtatcagagtcatcttggtagtggaatgagggtcttgcttataactaatgac
agggagaataagagaaaggctaccgaggagggcatttctgcagagacagttgagtcatat
gtgaagtccctgggtaaaccagatttgctggatcttcttgtgaggcctgtctctcaagat
gtagacatggagactgttgaagatttgagaccatcaaagaggaaagtcatatatattgag
cataagcctatttctgagattacatctggcttgctctgtggaatttatcatcaaggaaaa
cttcgtgttaaccgttataatccttttgaagcatatgttggaagtgagagcattggagat
gaaataattatatatggacgtggtaacatgaacagagcttttgatggagatgttgtggct
gtggaacttttgccacaagaccaatggcacgaggaaaagtctttatctatagcagatgaa
gaggatgaggaggaagaggatgttcatttagctccaagcagtgctgatgatgcacctaga
aatacaaatctagtgcaagggggctctagagagacaaatcctgtctcatgtcgtccatct
ggtcgtgtggttggtgttataaagcggaactggcactcttattgtgggtctttggagcca
atgcctttgcctgcaggtaatggtggtgttgcacatgctttatttgtctccaaagatcgc
agaattcctaagattcggatacaaactcgacagcttgggaatcttctggacaagagaatt
attgtggctgttgattcttgggattgtcaatctcgctatccttcaggccattatgtgcga
accgtaggacaaataggtgatagagaaactgaaagtgaggtggttttgatagagaatgat
ataaactctagaccattttcttctcaagtattggcatgcttgcctccattgccatggtct
gtgtcttctgaagatctggcaagtcccattaggcaagatttgcgacatttgcatgttttt
agtgtggatcctcccggatgcaaggatattgatgatgcactgcactgtacggctcttcca
aatggaaattttgaagtaggagttcatattgctgatgtaacgaattttgttcatccgggc
actccccttgatgacgaagcagcacagaggggcacttctgtttaccttgttgagcgccga
atcgatatgcttccaaaacctctaacagaagatatatgttctcttcgatctgatgtagag
aggctagcattctcagttgtttgggaaatgacacctgaagcagagattatttctacaaga
tataccaaaagtatcattaaatcttgtgcagcattgtcttatattgaagctcaagctagg
atggatgatagccggttgatggatccactgaccatagatttgcgaaatatgaatgcttta
gcaaagataatgaggcttaggcgtattgacagaggagccttaactcttgcttctgctgaa
gtcaagtttgaaatagacactgagactcacgatcttcttgatattggtatgtaccaaatt
cgagaagcaaaccaaatggttgaggagtttatgcttgctgctaatgtttcagttgcagaa
aaaatcctgaaacattatcccttatgctcattgctaaggcgccatcctagcccaacccga
gagatgcttgagcctctgctgcaaacagctactgctgttggactcaacttggatatctca
tcatcaaaatccctggctgattcgcttgacaatgctgtgggtgatgatccgtacttcaat
aagatgattcggatactagcaaccagatgcatgacacaggcagtttacttctgtagtggg
gatctcagtcccccagaatttcatcattatgggcttgcttcacctctctatactcatttt
acctctcctatacggagatatgcagatgtcattgtacataggctgcttgctgcatcttta
gggatatacaagcttccagcaattttccaagacagaccccaactcacaaatattgctgat
aatttgaattatcggcataggaatgctcagatggcaagcagatcttcagtagagctccat
acggtgatccatttcagaaatcggccgacagacacagaggccagaatagtaaagataaga
tcaaatggttttattgtctttgtgcccaagtttggcattgaagggcctgtgtacttggca
gccagaactgagaatgcgggtggagaatgggtggtagatgagcaacagcagaaggttaag
aaaagggatggtagcattttttacggagtcttgcagatggtgaggattcacatggaggtt
gtggagccccagcccaatcgccccaagctccaactcaccctcatctag
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