Malania oleifera: 131155789
Help
Entry
131155789 CDS
T09312
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131155789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131155789
Enzymes [BR:
mof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
131155789
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131155789
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131155789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
131155789
NCBI-ProteinID:
XP_057965177
LinkDB
All DBs
Position
5:34823487..34889663
Genome browser
AA seq
392 aa
AA seq
DB search
MKKTLSVLHRLLSSSSFPRRNCLGKMSTIAVPVCPKFNSIKESENNRSDLSGFKFRLVSY
NILAQVYVKSSLFPHSPSPCLKWKSRSKAILTVLKSFGADFLCLQELDEYDSFYKGNMES
RGYSSIYIQRSGQKRDGCGIFYKHDSAELVLEETIEYNDLVNLVQDSSISCDAKHIDMLS
GGNEDAGPKDGSATKKSPEDSEDPNDPRVRLKRDCVGIMAAFKLKDPSHHTVIVANTHLY
WDPEWADVKLAQAKYLLSRLAQFKILVSNRFDSAPSVILSGDFNSTPGDKVYQYLISGNS
LQVPQLECSGDLPIPICSVYAFTRGEPAFTNCTPGFTGTIDYIFFSPSSLIKPVSLLQLS
ESDAPDIVGGLPNYHHPSDHLPIGAEFTINRA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactctttccgtgcttcatcgtctgctctcgtcctcttcattcccgaggaga
aattgtttaggcaaaatgagcacaatagctgtaccagtatgtccaaaattcaactctata
aaagagagtgaaaataatagaagtgatctttctggcttcaaatttcgtcttgtttcatat
aacattttggctcaggtgtatgtgaagagttctttgtttccgcactctccctcaccttgt
ctcaagtggaaatctcgttccaaggcaatactaactgttctcaagagctttggggctgac
ttcctctgcctacaggaactagacgagtatgatagcttttacaaaggcaatatggagagc
cgtggctattctagcatctatattcaaagaagtgggcagaagcgtgatgggtgtggaatt
ttttacaagcatgacagtgcagagttggtcttagaggagacaatagaatacaatgatctt
gtaaacttggttcaagattcctccatctcatgtgatgctaagcacattgatatgctatca
ggtggaaatgaagatgctggaccaaaagatggttcagcaacaaaaaaatcaccggaggat
tctgaagatcctaatgatccccgtgtaagattaaaacgtgattgtgttggaattatggct
gcgtttaaacttaaggatccttctcatcatactgttattgtggcgaacactcatctttat
tgggatccagaatgggctgatgttaagctggcacaagctaaatatctcctctctcgttta
gctcaatttaaaatactggtatcaaacagatttgactctgcaccgtcagtaattctgtca
ggtgacttcaattcaacccctggtgataaggtgtaccagtacctcatttcaggcaactct
ttacaggtaccacaactggaatgctcaggagatctccctattccgatatgcagtgtctat
gcatttacaagaggagaaccagcattcacaaactgcacccctggttttactgggactatt
gattatatattcttttccccatctagcctcatcaagccggttagtcttctccaactttct
gaatcggatgctcctgacatcgttggtggattgccaaactaccaccacccaagtgatcat
ctgccgattggtgctgaattcacaataaacagggcgtaa
DBGET
integrated database retrieval system
