Malania oleifera: 131156760
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Entry
131156760 CDS
T09312
Name
(RefSeq) DNA mismatch repair protein MSH6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
mof
Malania oleifera
Pathway
mof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131156760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mof03400
]
131156760
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131156760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_KDM3B
Motif
Other DBs
NCBI-GeneID:
131156760
NCBI-ProteinID:
XP_057966668
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All DBs
Position
5:complement(106846190..106884867)
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AA seq
1316 aa
AA seq
DB search
MAPSRRLSNGRSPLVNQQSQITAFFSKSSSSSSPTLSKKSSNPNPNASSSPSPSPSPTTP
SPVQSKHRKPLLLVGPSPTRSPPAPASDTATTPDVSRKSYGEEVVGRRIRVYWPLDQSWY
EGCVKSFDKIAGKHLVQYDDSEEEVLVLSKEKIEWVEVSAVRRFRRLRRASVVEEENVEQ
EEENVEQVEEDSGGDDSTDEDWGKNVADEGVEDESEYMELEDEDEEVKDEVRRSKGTQNK
NLESKKRRTIGGENSCSSKKNKSGGQADEKGLKVMGVNGGRFGETTNVTERMKASHDFES
VLVGDAAERFGLREAEKLPFLGKDLRDAKRRRPGHENYDPKTLYLPPDFLKSLSGGQRQW
WDFKSKNMDKVLFFKMGKFYELFEMDAHIAAKELDLQYMKGEQPHCGFPEKNFSMNVEKL
ARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLLANPEASY
MIAVTERCPIPGSQKEERIFGVCVVDVATNRTILGQFGDDSECSALCCLLTELRPVEIIK
PSKLLSSETERMLLGHTRNPLVNELVPLLEFWDAERTVCEVKRIYKNVDGQSVHGSSNES
YLHASDVYVGKSDLDCLPDVLSELIGAGEDGSCALSALGGTLFYLKQAFLDETLLRFGKF
ELLPCSRFSDITQIPYMVLDAAALENLEIFENSRNGDSSGTLYAQLNHCVTAFGKRLLKT
WLARPLFNLRSIRERQDGVAGLRGVNLPFALEFRKELSRLPDMERLLAHLFASSKANGRN
ANKVVLYEDAAKKQLNEFISALRGCELMAQACSSLGAELENVKSELLNNLLTPGKGLPDV
CSILKHFKEAFDWVEASDSGRIIPHEGVDAEYDSACEAVKEVENSFKKHLKEQRKLLGDS
SINYVTVGKESHLLEVPESLRGTVPRNYELRSSKKGFFRYWNADIKRLLGELSQAESEKE
SKLKSILQRLIGRFCEHHNEWRQLVSAIAELDVLISLAIASDFYEGPTCRPVVSGLASSN
EVPYCSAKSLGHPILRSDSLGKGTFVPNDITIGGSGNASFILLTGPNMGGKSTLLRQVCL
AVILAQVGADVPAENFELSLVDRIFVRMGAKDHIVTGQSTFLTELSETACMLSSATCNSL
VALDELGRGTSTSDGQAIAESVLEHFVRMVQCRGMFSTHYHRLAISYQRDPKVSLCHMAC
QVGQGDGVEEVAFLYKLTPGACPKSYGVNVARLAGLPDSVLKIAAAKSREFEAVYGKKGR
RTVGSSSIQGQEEEMLAFMQNFVSAAAKLSCHSSKNASIGILSDLQHQARMLLQQY
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggctccttcaaggcgccttagcaatggccgatcaccactggttaaccagcagagtcag
atcacagccttcttctcaaagtcttcatcttcatcttctcctactctttccaagaaaagc
tccaacccgaaccctaacgctagctcaagcccaagtcctagtcccagccccacaactcct
tcccctgttcaatccaaacacagaaagcctctcttgctcgttggcccgtctcccactcgc
tctccccctgctcccgcttctgacactgcaacaacgcccgatgtctcaaggaaatcgtac
ggggaggaggttgtcggcaggagaattagggtttattggcccttggatcagagctggtat
gagggttgtgttaaatcgtttgataagatcgccggtaagcatttggttcagtacgatgac
agcgaggaggaggttctagtcctttctaaagagaagattgagtgggttgaggtatcagcg
gtgaggaggtttcgccggctgcgtcgcgcctcagttgttgaggaggaaaatgtggagcag
gaggaggaaaatgtggagcaggtggaggaggatagtggcggagatgattctactgatgaa
gattggggaaagaatgtggcggatgaaggagtggaggatgagtctgagtatatggaattg
gaggacgaagatgaagaagttaaagatgaagtgcgtaggtcgaagggaacgcagaataag
aacctagaatcaaaaaagaggagaacgattggaggagagaactcatgttcaagtaagaag
aacaagagcggcggccaagcagatgagaaagggcttaaagtaatgggtgtcaatggaggt
agatttggggagactacaaatgttactgagcgtatgaaggcatctcacgattttgagagc
gttttagtcggtgatgctgctgagaggtttggtttgcgtgaagcagagaagttgcccttc
cttgggaaagatcttagggatgctaagagaaggcgtcctggacatgaaaattacgacccg
aaaactctttatttaccacctgatttcttgaagagtttgtctgggggccagagacaatgg
tgggattttaagtcaaagaacatggacaaagttctatttttcaagatgggcaaattctat
gagcttttcgaaatggatgctcatatagcggcaaaagaacttgatttgcaatatatgaag
ggagaacaacctcactgtggatttccagaaaagaacttttcaatgaatgtagagaaattg
gctagaaagggttatcgagttcttgttgtagagcagacagagacaccggaacagcttgaa
cttcgtcgcaaagaaaagggttcaaaagataaggttgtaaaaagagaaatatgtgctgta
gttacaaaaggaacactaactgagggagagatgctgttggccaatcctgaggcttcttat
atgatagcagtgactgaacgctgtccaataccgggaagccagaaggaggaacgaattttt
ggtgtttgtgtggttgatgttgccacaaacaggaccattcttggacagtttggagatgat
tcagagtgcagtgctttgtgttgtctcttgactgagctgagaccagtagagattataaaa
ccttccaaactgcttagctctgaaactgagaggatgctgctgggacatacaagaaatcct
ttagtaaatgaactggttccattgttggaattctgggatgctgagaggactgtttgcgaa
gtcaaacgaatctataagaatgttgatggtcagtcagttcatggatcttcaaatgaatca
tacttgcatgcaagtgatgtttacgttggaaaaagtgacttggactgcctgccagatgtt
ttgtctgaattgattggtgcaggcgaggatggaagctgtgctctttcggctcttggaggc
actcttttctatctgaagcaagcttttcttgatgagacattgcttaggtttggaaagttt
gagttgcttccatgctcccgtttcagtgatattactcagataccatacatggttcttgat
gcggctgccttagagaaccttgaaattttcgaaaacagccgaaatggggactcttcaggg
acattatatgcacaactgaaccactgtgtgactgcatttgggaagaggttgctgaagaca
tggctagcaagacctttatttaatttgaggtcaattagggaacgtcaagatggtgtggct
ggtctaaggggagttaatctgccttttgcacttgaatttcggaaagagttgtccaggctt
ccagacatggagcggttgcttgcccacctatttgctagcagcaaagcgaatggaaggaat
gcaaataaagtagttttatatgaggatgcagcgaagaaacagctcaatgagttcatatca
gctctacgtggttgtgaattaatggcccaagcatgttcttcacttggtgctgaattggaa
aatgtcaaatctgaactattaaataacttgctcacacctggcaaaggtcttcctgacgta
tgttcaattctaaagcatttcaaggaggcttttgattgggtggaggccagtgattcagga
cgtataatacctcatgaaggagttgatgctgagtatgactctgcttgtgaagcagtgaag
gaagttgagaatagtttcaagaaacacctcaaggaacagcggaagttacttggagattct
tctatcaattatgtcacagttggaaaagagtcacatcttttagaagtgccagaaagtttg
cgtgggacagttcctcgcaattatgagttacggtcctccaaaaagggcttcttcaggtat
tggaacgcagatattaaaaggttgttaggagaactatcacaggctgagtctgaaaaggag
tctaagttgaaaagcattttgcagaggttaattggacgtttttgcgagcatcataatgag
tggagacaattggtttctgcaattgcagaattggacgtcttgatcagtttagcaattgca
agtgacttttatgaagggcctacctgccgtccagttgtctccggcttagcaagttcaaat
gaagtgccatactgtagtgcgaaaagcttgggacatccaattcttagaagtgattctttg
ggcaagggtacctttgtgcccaatgacattactattggtggttctggtaatgccagcttt
atccttctcactggtcctaatatgggtggaaaatcaactcttcttcgccaagtttgctta
gctgtaatattggcacaagtgggagcagatgttccagcagagaactttgaactgtcgctt
gttgaccgtatctttgttcgaatgggtgccaaagatcatattgtcacaggccagagtact
tttttaacagagctttcagaaactgcttgtatgctgtcgtcagcaacctgtaattcgctg
gtggcactagatgagctcggacggggaacatcaacctcagatggacaagccattgcggaa
tcagttcttgaacattttgtccgcatggtgcagtgtcgaggaatgttctctactcactat
caccgattagccataagctaccaaagggatcccaaggtatccctatgccatatggcatgc
caagttgggcaaggagatggggtggaggaagttgcattcctttataagttgacacccggt
gcatgccctaaaagctacggggtaaatgttgctcgactagctggactccctgattctgta
cttaaaattgctgctgctaaatcaagagagtttgaggctgtgtatggtaaaaaaggaagg
agaactgtgggtagctcgtctattcagggtcaggaagaggagatgctggctttcatgcaa
aacttcgtcagtgctgctgctaaattgagttgccattcttccaagaatgcaagtattggc
atactgagcgaccttcagcatcaagcaagaatgcttcttcagcaatattga
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