Malania oleifera: 131157057
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Entry
131157057 CDS
T09312
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
mof
Malania oleifera
Pathway
mof03420
Nucleotide excision repair
mof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131157057
09124 Replication and repair
03420 Nucleotide excision repair
131157057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mof03051
]
131157057
03400 DNA repair and recombination proteins [BR:
mof03400
]
131157057
Proteasome [BR:
mof03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
131157057
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
131157057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
UBA_RAD5A
TECR_N
Colicin_E5
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
131157057
NCBI-ProteinID:
XP_057966896
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Position
6:complement(37731613..37761230)
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AA seq
384 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDVQGKDNYPCGQQLLIHNGKVLKDESTLV
ENKVSEDGFLVVMLSKSKTMGSSGASSNQSTPATAPPATAPTPSPASVPEAPVQAPDPKG
TTSTSDVTTANVPTDVYGQAASNLVAGNNLEQTIQQIMDIGGGNWDKETVTRALRAAYNN
PERAVDYLYSGIPEAAEVSVPVARFPANQGTAGVNPATETGAAAAAPVSGAPNSSPLNMF
PQFLQETLSAASGGGLGSLDFLRNNPQFQALRSMVQANPQILQPMLQELGKQNPQLLRLI
QDHHAEFLQLINEPLEGSEGDLFDQQEQDMPHAINVTPAEQEAIERLEAMGFDRALVIEA
FLACDRNEELAVNYLLEHAGDYED
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccgttaagactctgaagggcagccatttcgaaattagggttcagcccact
gacaccgtcatggccgttaaaaaacatattgaagatgtacaaggaaaagacaactatcca
tgtggacaacaattattgattcacaatgggaaggttttgaaagacgaaagtacattagta
gagaacaaggtttctgaagatggttttcttgttgtcatgcttagcaagagcaaaactatg
ggctcgtctggagcctcatccaaccagtctactcctgcaactgcacctcctgccactgca
ccaacccctagtcctgcttctgttcctgaagcacctgtacaggcaccggacccaaagggc
accacatctacatctgatgtaacaacggccaatgtccctactgatgtatatggtcaagct
gcttccaatttagttgctggtaataatctcgaacagactattcaacaaataatggacata
ggtggtggcaactgggacaaggaaactgttactcgtgcactacgggcggcttacaataac
ccagagcgagctgtggactacttatattctggaattccagaagcggcagaagtttctgta
ccagtggcccgttttcctgcaaatcaaggaaccgctggagttaatcctgcaactgaaact
ggtgcggctgctgctgcaccagtctctggggcacccaattcatctcccctaaatatgttt
cctcagtttctgcaggagaccctttctgctgcaagtggcggtgggcttgggtcccttgat
ttccttcgaaacaacccacagttccaagcattgcggtcaatggtgcaagcaaatccacag
attttgcagcctatgcttcaggagttaggcaagcagaatccccagcttttaagattaatt
caggatcaccatgcagagtttcttcaattaataaatgagcctcttgaaggttctgaaggg
gatttatttgatcaacaagagcaggacatgcctcatgctatcaatgttacgccagcagag
caggaggctattgaacgactcgaggcaatgggatttgatagagctcttgtcattgaggca
tttttagcttgtgatcgcaatgaggaattggcagtcaactacctattggagcatgctgga
gattatgaggattga
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