Malania oleifera: 131157166
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Entry
131157166 CDS
T09312
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
mof
Malania oleifera
Pathway
mof03030
DNA replication
mof03420
Nucleotide excision repair
mof03430
Mismatch repair
mof03440
Homologous recombination
mof03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131157166
03420 Nucleotide excision repair
131157166
03430 Mismatch repair
131157166
03440 Homologous recombination
131157166
03460 Fanconi anemia pathway
131157166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mof03000
]
131157166
03032 DNA replication proteins [BR:
mof03032
]
131157166
03400 DNA repair and recombination proteins [BR:
mof03400
]
131157166
Transcription factors [BR:
mof03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131157166
DNA replication proteins [BR:
mof03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131157166
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131157166
MMR (mismatch excision repair)
131157166
DSBR (double strand breaks repair)
HR (homologous recombination)
131157166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
131157166
NCBI-ProteinID:
XP_057967095
LinkDB
All DBs
Position
6:79185338..79188941
Genome browser
AA seq
624 aa
AA seq
DB search
MPVNLTPNAIAAINAGDVNAKPLVQVLDIKLIGSTQERYRFLLSDAVLTQHAMLATQLND
RVKSGGVRKGSVVQLIEYICSTVQNRKIIVVLNMETIIPDCEIIGNPKMFTESDTTAPKA
VQGCNLEHAGSTSNGNSSLKTSGNKMQSFRPTVQPSYQPPPNYRNHGPILKNEAPARIIP
IAALNPYQGRWAIKARVTVKGDLRRYNNARGDGKVFSFDLLDLDGGEIRVTCFNAVVDRF
YESIEVGKVYMISKGNLKPAQKNFNHLKNEWEIFLEATSNVELCQDEDGSIPKQLFSFRP
ISEIENADNNSIIDIIAIVISVNPSVPILRKNGTETQRRILNIKDGSGRSVELTLWGDFC
NREGQQLQEMLDSGDFPVLAVKSGKVSDFTGKSIGTISTTQLFINPDFQEAQRLRDWFDH
EGKNTASQSISRDVMPGGPRNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIKTDTFCY
TACPLMIGDIQCNKKVTKSGNTRWQCDRCNQEFDVCDYRYLLQAQVQDHTGLTWVTAFQE
CGEEILGCSAKELYDLKYEEQDEIRFGDIIQSRLFKDYLFRLKIKEEMYGEEQRVKITVV
KAEKVNYSAESGFLLNLIPKNRQY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacgccgaatgcaatcgctgcgatcaacgccggcgatgtgaatgcg
aagccgctagtgcaggtattggacattaagctcatagggagcacgcaagagaggtacaga
tttctgctctccgatgccgtattgactcagcatgcgatgctggcgactcagctcaatgat
cgagttaagagcgggggagttcggaaaggatcggtggttcaattgatcgagtacatatgc
agcacagttcagaatcgcaagattattgttgtgctgaacatggaaacaataataccagac
tgcgaaataataggaaacccgaaaatgtttaccgagtctgatactactgctccaaaagca
gttcaggggtgcaacttggagcatgcagggagcaccagcaatggtaattcgagtttgaaa
acgtctggaaacaaaatgcagagttttcgcccaactgttcaaccttcatatcaaccacca
ccaaattacagaaatcatgggccaattttgaagaacgaggcaccagcacgcataatccca
attgctgcattaaatccttatcaaggaaggtgggctatcaaggcaagagtaaccgtaaaa
ggagatctccgccgctacaacaatgctaggggggatgggaaggtcttctcctttgatcta
ctcgatttggatggaggtgaaattcgagttacctgctttaatgctgttgttgacagattc
tatgagagtattgaggttggcaaagtttatatgatatcaaagggtaacttgaaacctgcc
cagaagaacttcaaccatcttaagaacgaatgggagatctttttggaggcaacttcaaat
gtagagctttgccaggatgaggatggttctataccgaagcagctgttctcctttagacct
atcagtgaaattgagaatgctgataacaattccattattgatatcattgccattgtaata
tctgtgaatccttcagtccctatcttgcgaaaaaatggtacggaaactcagagaagaatt
ctgaatataaaggatggatctggtcgaagtgttgagctaaccttgtggggcgacttctgc
aacagggaaggtcagcagctgcaagagatgcttgattctggggatttccctgttttagct
gttaaatccgggaaagttagtgacttcactgggaaatctattggaacaatttctaccacc
cagcttttcattaatccagattttcaagaagctcagaggttgagagactggttcgaccat
gagggaaaaaacactgcatctcaatccatctccagagatgttatgcctggtggacctagg
aatgagatacgtaaaactgtgtctcagatcaaagatgaaggtcttggaagatcagataaa
ccagactggatcactgttaaggcaaccatatctttcatcaagacagatactttttgttac
actgcctgtccactgatgattggagatatacagtgtaataagaaagtgacaaagtccgga
aacacgagatggcaatgcgataggtgcaatcaagaatttgatgtttgtgattaccggtat
cttcttcaagctcaagttcaagatcacacaggattgacttgggttacagctttccaggaa
tgcggagaagagatcttaggttgctcagcaaaagagttgtatgacttgaaatatgaagaa
caggatgagatcaggttcggtgatattatccaaagcagactctttaaagattatctcttc
agacttaaaatcaaagaggaaatgtatggtgaggaacagcgggtgaagatcaccgttgtt
aaggcagagaaggtgaattattctgcagagagcggatttctgcttaatttgattccgaaa
aataggcaatattga
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