Malania oleifera: 131157607
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Entry
131157607 CDS
T09312
Name
(RefSeq) probable CCR4-associated factor 1 homolog 6
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131157607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131157607
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131157607
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131157607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
131157607
NCBI-ProteinID:
XP_057967875
LinkDB
All DBs
Position
6:complement(110452176..110453747)
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AA seq
274 aa
AA seq
DB search
MSTFPKSKSIHIREVWNDNLEEEFALIRNIVDDFPYVAMDTEFPGIVLRPVGNFKSSTDY
VFHTMKANVDLLKLIQLGLTFSDDKGNLPTCGTDKYCVWQFNFREFNPNEDVYANDSIQL
LCQSGIDFKKNSERGIDAHRFSELLMSSGIVLNDNVHWVTFHSGYDFGYLLKLLTCKNLP
ETQVEFFNLINMYFPTLYDVKHLMRFCNSLHGGLNKLAELLEVERFGACHQAGSDSLVTS
CAFMKLKETFFDGSTEKYAGVLYGFGVENGQNTH
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttttccgaagagcaagtcgattcacatcagagaagtttggaatgataatcta
gaggaagaatttgcattgattcgcaatatcgttgatgatttcccttacgtagctatggat
acagagttcccgggcatcgttcttcggccagtagggaattttaagagcagtactgattat
gtatttcataccatgaaggccaatgttgatcttttgaagttaattcagttgggtcttacg
ttttctgatgacaaggggaaccttcccacatgtggaactgataagtattgtgtgtggcaa
ttcaactttcgtgagtttaatcctaatgaagatgtttatgctaatgactccattcagctt
ttgtgtcagagcggcattgattttaagaagaacagtgaaaggggtatcgatgctcaccgg
ttcagtgagcttctgatgtcatcagggattgtgttgaatgataatgtccactgggttaca
tttcacagtgggtatgattttgggtacttgctcaagcttcttacttgcaaaaatttgccc
gaaacacaggtggagtttttcaatttgatcaacatgtacttccccacactttatgatgtt
aagcatctgatgaggttctgcaacagcctccatggtgggttgaacaagctcgcggagctg
ttggaagtggagaggtttggtgcttgccatcaagctggttcagatagtcttgtcacatcc
tgtgcattcatgaagttgaaagaaactttctttgatggctcaactgagaaatatgctggt
gtgttgtatggttttggtgttgaaaatggacaaaatactcattaa
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