Malania oleifera: 131159235
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Entry
131159235 CDS
T09312
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131159235
Transcription machinery [BR:
mof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
131159235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
131159235
NCBI-ProteinID:
XP_057969958
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All DBs
Position
7:95945258..95949923
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AA seq
518 aa
AA seq
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MMATGTGTAAVIGLSAGKRFLSSSFHYSDVTDKLSNVAAGDLHTSSPHYHYHLYNNITNS
RRPSNYSPLFPSNRPHQSIKALKEHVGSASDLPTTDPWIPKSDAFEEIEGFDPDSSVEAL
LLLQKSMLEKQWNLSFEPAVVTPDSPAKRDRRKVPVTCSGVSARQRRMNSRRRNQGRNGF
LTEPSMGKQLRSMISPDLLRTHPKGYVKGVTSEKLLSQAEVARLSKKIKAGLSLEDHKSR
LKERLGYEPSNEQLATSLGISRAELQSKMIECSFAREKLAMSNVRLVMSIAQRYENMGAE
MADLVQGGLIGLLRGIEKFDSSKGFKISTYAYWWIRQGVTRALTDNSRTLRLPNHLHERL
NLIKNAKTRLEEKGITPSIDRVAKSLNMSEKKVRNAAEADSKVFSLDREAFPSLNGLPGE
TLHSYIADTHPENNPWHGIDEWALKDEVNKLLNATLRERERDIIRLYYGLDNECLTWEEI
SKRIGLSRERVRQVGLVALEKLKHAARKRRLEAMLVKN
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacgggcacaggcacagcggcggttatcggactcagcgcagggaagaggttc
ttgagctcttctttccattactccgatgtcactgataagctctccaatgtcgccgcgggc
gacctccatacatcctcgccgcactaccactatcacctctataataatatcacgaactct
agaagaccctccaattacagcccccttttcccctcaaatcgaccgcaccaatccatcaaa
gccctcaaagagcacgtgggttctgcctccgacctcccaactacagacccatggattccc
aagtctgacgcatttgaagagattgaaggtttcgatcccgattcctctgtggaggctctc
ctcttgctccagaaatctatgctcgagaagcagtggaatctttccttcgagcccgctgtt
gtaactcctgattcgccggcgaaaagagatcgccggaaggttcctgtaacttgttcgggg
gtttccgccaggcaaaggagaatgaacagtcggaggagaaatcagggccgaaacgggttt
ttgacggaacccagtatgggtaagcagctgagatcaatgatcagtccagacctgcttcgg
actcatcccaaaggttacgtgaaaggtgttaccagtgaaaaattgctcagccaagccgaa
gttgcgcgcctctcgaagaagattaaagctgggctttccttagaggaccataaatcaaga
ctgaaggaaagactaggatatgagccttctaatgaacaactcgcaacttctttggggata
tctcgtgccgagttacaatccaaaatgatagaatgttcttttgcaagagaaaagctggca
atgagcaatgttcgattggtcatgtctattgctcaaagatatgagaacatgggtgctgaa
atggcagacctagttcagggtggattgattggcctactccgcgggattgagaaatttgat
tcttcgaaaggattcaaaatttcaacttatgcctactggtggatacgtcagggtgtaaca
agagcacttacagataattcaagaaccttaagattgcccaatcatctgcatgaaagatta
aatttaatcaagaacgcaaagactagattggaagaaaaaggaataactccatcaattgat
agagttgcaaaaagtctgaatatgtccgaaaagaaagtcaggaatgctgcagaggcagac
agtaaggtcttctcactagacagggaagctttcccctctttgaatggtcttccaggagaa
acacttcatagttacattgcggacacacaccctgagaacaacccatggcatggcatagat
gaatgggcactcaaggatgaagttaacaagctccttaatgcaactcttagggaacgggag
agagatattatacgtctttattatggtttggacaatgaatgtcttacatgggaagagatt
agcaaacgaataggattgtcaagagaaagagtaaggcaagttgggcttgttgcattggag
aaattaaagcatgctgcaagaaagagaaggctggaggccatgctggtgaaaaattag
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