Malania oleifera: 131159670
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Entry
131159670 CDS
T09312
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mof
Malania oleifera
Pathway
mof04120
Ubiquitin mediated proteolysis
mof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131159670
04120 Ubiquitin mediated proteolysis
131159670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mof04121
]
131159670
Enzymes [BR:
mof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131159670
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131159670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
131159670
NCBI-ProteinID:
XP_057970729
LinkDB
All DBs
Position
7:100348805..100382774
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AA seq
552 aa
AA seq
DB search
MMKLQTYAGFSLVATLAIIYHAFNSRGQFYPAMVYLSTSKISLALLLNMGLVIMCTLWQL
TKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPTLSHIRIISFMGFLLLIDSLSLYSSLKFLIQTRQASVSLFFAFEYM
ILATTTVSTFLKYVFYVSDMLMDGQWERKAVYTFYLELIRDLLHLSMYMCFFLVIFLNYG
VPLHLIRELYETFRNFKVRCTDFLRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENSTHVAGGHRSRSDVHQQGSGIA
STSAQGSGGGGAADDNLSQHQARLQAAAAAASIYEKSYVYPYASTLAWSSGYALLPQAHR
PLADSNSMDSSEGQAASGLQQNQQFALPGHTNFPFSQFPPSTFVPFQAPVTNFTSGVRLG
SYPNLPLVQLEAQKKLLENQIEVLRNQLQLLQNPKHEECVDAGPSASSDAKGKSVAAASS
SASDSGHHGEGD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacgtatgcggggtttagcttggttgcaactctagccattatttat
catgcgtttaatagtagagggcagttctacccagctatggtttatctgtcgacctccaag
atcagtttggcccttcttctcaacatgggtctggttattatgtgcactttgtggcaactg
acgaagaaggtgttccttggctctctccgagaagcggaggttgagagattgaatgagcag
tcatggagggaagtcatggaaattctatttgcaatcactattttccggcaggacttttcc
gttacattccttgctatggtcactgctctcctgttaatcaaggccttgcattggttggct
cagaagagggttgagtacattgaaacaaccccgtctgtgcccacattgtcgcacatacgg
ataatttcttttatggggttcctcctccttatagatagtctctctttgtacagttcttta
aagtttttgatacaaacgcggcaggcttcagtttctctcttctttgcatttgagtatatg
atattggcaacaacaacagtgtcaacattcttgaagtatgttttctatgttagtgacatg
ctcatggatggacaatgggagagaaaggccgtctataccttttacttggaactgatccgt
gatttgctgcacttatctatgtacatgtgcttctttcttgtgattttcttgaattatggt
gtgcctctgcatctgattcgtgagctttatgagacatttcgtaactttaaagttcgttgt
actgatttcttacgttaccgaaagatcacctcaaatatgaatgatcgttttccagatgca
acgcctgaagaactcaatgcaagtgatgcaacttgtattatttgccgtgaggagatgacc
acggccaaaaaacttatttgtgggcatcttttccatgtgcattgcttgcggtcatggtta
gagcgccagcatacttgtcctacttgtagggcccttgttgtaccccctgaaaatagcaca
catgtggctggaggacatagatcacggtcagatgtgcatcaacaagggtcaggcatagct
agtacctctgctcagggctcaggtggtggtggtgcagcagatgacaatttgagccaacat
caagccagactccaagctgctgctgcagctgcctcaatatacgagaaatcttatgtttat
ccttatgcaagtacactagcatggtcatctggatatgctttacttcctcaggcacataga
ccattggctgattctaacagcatggattctagtgaagggcaagctgcttctgggctgcaa
caaaaccaacagttcgcactcccaggacatactaatttccccttctctcagtttccgccc
tcgacttttgttccttttcaggcacctgtcaccaatttcacatctggagtgagattgggc
agttatcctaatttaccgttggtgcagttggaagctcagaaaaagcttcttgaaaatcaa
attgaggttctgagaaaccaactccaacttctacagaatcccaaacacgaggagtgtgtg
gatgcaggtccctcagcatcatcagatgctaagggaaagtctgttgctgctgcatcttca
tccgcttcagactctggtcatcatggggagggagattaa
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