Malania oleifera: 131159769
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Entry
131159769 CDS
T09312
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131159769
03036 Chromosome and associated proteins [BR:
mof03036
]
131159769
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
131159769
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
131159769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
SPT6_acidic
HHH_7
YqgF
Spt6_S1
Tex_central_region
HTH_44
HHH_9
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
131159769
NCBI-ProteinID:
XP_057970914
LinkDB
All DBs
Position
7:complement(67145222..67171741)
Genome browser
AA seq
1727 aa
AA seq
DB search
MGKTVVSDDEEEVELEEDEREPVDGEDVEERDGDEDEDSEEGQDEYEKDGFIVDDEEEEE
QEEEADSDDDRQKKKKRKKRESEKNYVLDEDDYELLQDNNITGFHRPKAESKKFKRLKKA
QRDTEEGHSGFSDEEEFDGSGKGGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQPEEEEDA
DIGEEDEMADFIVDEEEVDEHGAPVRRKKLNRKKSKQAPGVSSSALQEAHDIFGDVDDLL
MRRKQGLDSGEWRERRLEDEFEPAVLSEKYMTEKDDRIREIDVPERMQMSEESTGPPPTD
EMSIVEESSWICNQLASGMVPLLGKQGTETNEGGQNQSINKDDVMRFLELVHLQKLDIPF
IAMYRKEEILSLLKDPEQHEADEENQDRAEKAPKMKWHKQVLWAIQDLDRKWLLLQKRKS
ALQLYYNKRFEEESRRIYDETRLTLNQQLFESIMKSLKAAESEREVDDVDSKFNLHFPPC
EAGLDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSSEQFGLQISLANMRMDELEDAKET
PEEMASNFTCAMFETPQAVLKGARHMAAVEISCEPYVRKHVRSTFMEKAVVSTRPTSDGN
LVIDSFHQFAGVKWLSDKPLTKFADAQWLMIQKAEEEKLLQVTIKLPEDILNKLLNDSRD
YYLSGGVSKSAQLWNEQREHILKDAFFGFLIPSMEKEARSLLMSRAKSWLLSEYGKAFWD
KVSVAPYQRKENDASSEDDAAPRVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTSRS
QNVNDQQRKKNNQQRVLKFMTDHQPHVVVLGAANLSCTRLKEDIYEIIFKMVEENPRDVG
HEMDGLSVVYGDESLPRLYENSRISSDQLPGQSGIVKRAVALGRHLQNPLAMAATLCGPA
REILSWKLYSLESFLSPDEKYGIVEQVLVDVTNQVGLDINLAASHEWLFAPLQFISGLGP
RKAASLQRSLVRSGAIFTRKDFVTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD
TRIHPESYGLAQQLAKDVYKEHVGSVANDDDDDDEEMEMAIEHVRDNPSSLRTMDLNMYL
ESKKRENKRETFLDIQLELIQGFQDWRKPYEEPSQDEEFYMISGETEDTLAEGRVVQATV
RRVQGQRAICVLDSGLTGMLSKEDYSDDSRDIVDLTDRLCEGDMITCKIKSIQKNRYQAF
LVCKDSDMRNNRYQNIQNLDPYYHEDRSTLQGEQEKARKEKELAKRHFKPRMIVHPRFQN
ITADEAMEFLSDKDPGESIIRPSSRGPSFLTLTLKVYDGVYAHKDIVEGGKEHKDITSLL
RIGKTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLGYRKFRKGSKAEVDELLRIEKAEYP
MRIVYCFGISHEHPGTFILTYIRSSNPHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHI
DDPQHDSAPSIRSVAAMVPMRSPASGGSSGASLGSGWGGSANSNDGSWRGQSFDRDRSAT
PGSRAGRSDFGNGGQDGHPSGLPRPYGGRGRGGRGGRGRGSYNGGRGNSSSNDRRDSDFG
TPKWGSASKEGDDGWGNFPGAKVQNSPGREAFPGGWGTGGHGSGGSWGGGSSSGGGSGND
KSGWGNESGGGGGGGGGGSSGGGWGGGGGGWGGSGGGGGGGGSGGGGWGGAGGSTWDSAG
SKLTGGIDSAAEMGNAGWGGGPKRSSSQTQAAGGWSEGGGGGSSGGW
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactgtagtttcagacgacgaagaggaggttgaactcgaggaggacgagaga
gaacctgtcgacggcgaagacgttgaagagcgcgatggcgatgaagacgaagactctgaa
gaggggcaggatgagtatgagaaggatgggttcattgttgatgatgaagaagaggaagag
caggaggaggaagctgacagtgatgacgataggcagaagaagaagaaaagaaagaaaagg
gagtcagagaagaactatgttcttgatgaagatgactatgagcttctgcaggacaacaac
atcactggttttcaccggcctaaagctgagagcaaaaagttcaagaggcttaaaaaagca
cagagggacactgaggaggggcactcaggattttctgatgaagaagagtttgatggaagt
gggaagggagggcgaacggctgaggagaagcttaagcgcagtttatttggtgatgatgaa
ggagcaccgcttgaagatattgctgaagaagaggaacagccagaagaagaagaggatgca
gacattggtgaagaggatgaaatggcagactttatagtggatgaagaagaagttgatgaa
catggagctcctgtgagacggaagaagctgaacagaaagaagtctaagcaggcaccagga
gtttcatcctcggctttgcaagaagctcatgacatatttggtgatgttgatgaccttcta
atgcgtcgtaagcaaggtttagattctggagaatggagggagaggagacttgaagatgaa
tttgaaccagctgtactttctgagaagtatatgacggaaaaagacgacaggattagggag
attgatgttccggaaagaatgcagatgtccgaggaaagcactggtcctcctccaacagat
gagatgagtatagttgaggagagcagctggatatgtaatcagcttgcatctggtatggta
cctttgttgggcaagcaaggtactgaaacaaatgaaggaggtcaaaatcaatcgataaac
aaggacgatgttatgagatttttggaattagtgcatttgcagaaattagatattcctttt
attgcaatgtatcgaaaggaggagattctgagcctcttgaaagacccagagcaacatgaa
gcagatgaagagaatcaggatagagctgagaaagcacctaaaatgaagtggcacaagcag
gtgctatgggcaatccaggatttggacagaaagtggttgcttcttcagaagcgaaaaagt
gctctccaattatattacaataagagatttgaagaagaatcccggagaatatatgacgaa
acgaggcttactttgaatcagcagctttttgaatcaattatgaagtcattgaaggctgca
gaatcagaaagagaggttgatgatgttgactccaagtttaacttgcattttcctccatgc
gaggctggattggatgaagggcaatataagagacccaagaggaaatcacagtatagcatc
tgcagtaaggcaggcctatgggaggttgcaaacaagtttgggtacagctctgagcagttt
ggattgcagatatctttagcaaatatgaggatggatgagttggaggatgccaaggaaaca
ccagaagaaatggcctcaaattttacatgtgcaatgtttgagacacctcaagctgtgctt
aaaggtgctagacatatggcagcagttgagatcagttgtgagccgtatgtcaggaaacat
gttcgcagtactttcatggaaaaggctgtggtatctacaagaccaacttctgatggaaat
ttggttatagactcctttcatcagtttgcaggggtgaagtggttaagtgacaagccattg
actaaatttgcagatgctcaatggctcatgatccaaaaggctgaagaggagaagctcctt
caagttaccattaagttacctgaagatattctaaataagttactaaatgattctagggat
tactatctcagtggtggggttagtaaatctgctcaactatggaatgagcagagggagcat
atactgaaagatgcattttttggttttcttattccttcaatggaaaaggaagctaggtcc
ttgttgatgagtagagcaaaaagctggttgctatcagaatatggaaaggctttttgggac
aaagtctctgtggcaccatatcaacgtaaggaaaatgatgcaagctctgaagatgatgct
gcaccgagggttatggcttgctgctggggtcctgggaagccagcaaccacttttgtaatg
ctggattcgtcaggagaagtgcttgatgtattatacacagggtctctcacttcacggtcc
caaaatgtaaatgatcagcagcgcaagaaaaataaccaacagcgtgttttgaagttcatg
acagatcatcaaccacatgttgttgttctaggggctgcaaatttgtcttgcacacgatta
aaggaggatatttatgagattatttttaagatggtggaggagaacccaagagatgttggt
catgagatggatgggctaagtgttgtatatggggatgaatctctacctcgtctctatgaa
aattcacgaatttcgtctgatcagttacctggacagtctggcattgttaagcgggctgtg
gctcttggacgacatcttcaaaatccattggcaatggctgcaacactttgtggacctgca
agagagatattgtcctggaaactttattctttggaaagctttctttcccctgatgagaag
tatggaattgttgaacaggttttggtggatgttactaaccaggtgggccttgacattaat
ttggcagctagccatgaatggttatttgcgccgctacagtttatttctgggcttggaccc
aggaaggcagcatccttgcaaaggtccctggtaaggtctggagcaattttcactcgaaaa
gactttgtaacagcgcatggactgggtaaaaaggtgtttgttaatgcagtcggtttcttg
cgtgttcgtcggagtggactggctgctagcagcagccaatttattgatttgttggatgac
actagaatacatccagaatcatatggtcttgcacagcagttggccaaagatgtttataag
gaacacgttggtagtgtcgcgaatgatgacgacgacgatgatgaggagatggagatggct
atagagcacgtcagagacaatccaagcagcttgagaaccatggatttaaatatgtatctt
gaatcaaaaaaacgtgagaacaagagagagacattccttgatatacagttggaactgata
cagggcttccaagattggcgtaaaccatacgaagaacccagccaggatgaggaattttat
atgatttcaggtgaaacagaggataccttggctgaaggaagagtagtgcaagcaacagtt
cgcagggtgcaaggtcaaagggcaatctgtgtgcttgattctgggttgactgggatgctt
tctaaggaagattattctgatgactcgagggacattgttgatttgactgataggctgtgt
gaaggtgacatgatcacctgcaagattaagtcaatccaaaagaataggtatcaggcgttc
cttgtttgcaaagacagtgacatgagaaacaatagatatcagaacattcaaaatcttgat
ccctattatcatgaagaccggagcactttacagggtgaacaagaaaaagctcgaaaagaa
aaggagcttgcgaagaggcattttaagcctaggatgattgtgcatccccgtttccaaaat
attactgctgatgaggcaatggagtttttgtcagacaaggatccaggtgaaagtattatc
cgtccaagttctcgtggaccttcttttttgactttaaccctgaaggtatatgatggagtt
tatgctcacaaggacatagttgaaggtggaaaggagcacaaggacatcacaagcttgctc
cgtatagggaaaacattgaaaattggggaggacacttttgaagatttggatgaggtgatg
gatcgatatgttgatccattggttgctcatttgaaggcaatgctgggttatcgcaagttc
aggaagggctccaaagcagaagttgacgagcttctgagaattgagaaggcagagtatcct
atgaggatagtttattgttttggcatatctcatgaacaccctggcaccttcatcctaact
tatatacgaagttcaaatccacaccatgagtacattggtctgtacccaaaaggattcaag
ttccggaaaagaatgtttgaggacattgatcgccttgtggcatacttccagagacatatt
gacgatccacagcatgattcagcaccatccattcggtccgtcgctgctatggttccaatg
cgcagccctgcctctgggggctcttcaggggcatccttgggtagtggctggggtggttca
gccaacagcaatgatggtagctggagaggtcagtcttttgacagagatagatctgctaca
ccgggctctagagctggccgaagtgattttggaaatggtggtcaggatgggcatccaagt
gggctccctaggccatatggtgggcgtggccgcggtggccgtggtggccgtggtcgaggt
tcttataacggtggcagaggaaatagctctagcaacgacaggcgtgattctgactttggt
actccaaaatggggttcagcttcaaaggagggcgatgatggatggggaaacttcccaggt
gctaaggttcaaaattcgcctggcagggaagctttccctggtggttggggcactggtgga
catggtagtggaggtagctggggtggtggcagcagtagtggtggtggtagtggcaatgac
aagagtggatggggaaatgaaagtggtggcggtggcggtggcggtggtggtggcagcagc
ggcggtggctggggtggcggtggtggtggctggggtggcagtggtggcggcggcggcggc
ggcggcagtggtggtggtggctggggtggtgctggcggtagcacctgggattctgctggg
tctaaattgactggtggaattgattctgctgcagaaatggggaatgctgggtggggtggt
ggccccaagagaagctcctcacaaacgcaagcagctggtggttggtctgaaggtggtggt
ggtggcagcagtggtgggtggtga
DBGET
integrated database retrieval system
