Malania oleifera: 131160554
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Entry
131160554 CDS
T09312
Name
(RefSeq) SWI/SNF complex component SNF12 homolog isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mof
Malania oleifera
Pathway
mof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131160554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131160554
03036 Chromosome and associated proteins [BR:
mof03036
]
131160554
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131160554
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131160554
PBAF complex
131160554
GBAF(ncBAF) complex
131160554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
131160554
NCBI-ProteinID:
XP_057972346
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All DBs
Position
7:107344522..107363961
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AA seq
558 aa
AA seq
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MANTNNNSMKNVGAPTQTQTPFGGNAGINHQSHLLSQTQSQTHGGSIFSGHFQLSEPQAQ
AVAQAQYAQAHAQAQAQAAHAQFQAQLQAQAQVHPSRVQNPGSGSISASSLSVSVPVTGG
VKRAQPKPPSRPPGSAASNTGLPFKTMELTPAARRKKQKLPDKQIPDKVAALVPESALYT
HLLELEARIDAALARKKSDIQESLRDPPTVQKTLRIYVFNTFINHLGSNPENENAEPPSW
VLKLTGRILENVVEPDPDGVLHKPNSWYPKFSSFFKRITIYLDQSLYPNNHVILWEKARS
SALHEGFEVKRKGDKEFTAMVRLEMNYMPEKLKLSPVLVDVLGIDVDTRPRIIAALWHYV
KVKKLQDPSDPSIFVCDPPLRKVFGEEKMKFAVVSQKISQHLSPPPPIHLVHKIKLSGNC
PAGTTCYDVLVDVPFQLEKEMSAFLANTGRHAEIDAYDDTITASIKKIHEHCRRRAFFLG
FSQSPVEFINALIASQSRDLKLAAGDASRNSEKEHRSDFYNQSWFEDAVVHYLNRKTAAG
SDAIGSTIIAHNLQQRRQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaccaataacaattcaatgaagaacgttggtgctccgacccaaacccaaact
ccttttggcggtaatgcggggataaaccaccagtcccatctcctctcacagacacaatct
caaacacatggtgggtctatcttttcgggacattttcagttgtctgagcctcaggctcag
gcggtggctcaggcacagtatgctcaggctcatgcccaagctcaagcccaagcggctcat
gctcaattccaagctcaattgcaggctcaagctcaagttcacccgtcccgtgtgcagaac
cctgggagtggttctattagtgcgtcttcactttctgtttcggtgccagtaacaggaggg
gtgaagagggctcagccaaaaccgccttctcgacctcctggttctgctgctagcaacact
ggattgccatttaagactatggagctaaccccagctgctcggaggaagaagcagaaactt
cctgataagcaaatacctgataaggtggctgcacttgtgccagagtctgcactttacacc
catttgcttgaattagaggcccggatagatgctgctcttgcaagaaagaagagtgatatt
caggagtcccttagggaccctcccactgttcagaaaaccctcaggatttatgttttcaac
acttttatcaaccacttaggatcaaacccggaaaacgaaaatgcggagcccccttcttgg
gtgcttaaattaactgggaggatcttggaaaatgtagtggagcctgacccagatggggtg
ctccacaagcctaattcttggtacccaaaattctcatcatttttcaagaggattaccatt
tacttagaccagagcctctatccaaataaccatgtaattttatgggagaaggcacgatca
tctgcacttcatgagggttttgaagtgaagagaaaaggggataaggagttcaccgctatg
gtgaggctagaaatgaattatatgcccgagaaactcaaactttctccagtgctggtggat
gttctcggcattgatgtagatactcgcccgagaattattgctgcactttggcactatgtg
aaggttaagaagttacaggacccaagtgatccttctatttttgtttgtgatccacctctt
cggaaagtatttggggaagagaagatgaaatttgctgtggtttcacagaagatatcacag
catttatctccaccacctcctatacatttggtgcataagattaagctttcggggaattgt
ccagctggaactacttgttacgatgtgttggttgatgtcccttttcaattagagaaggaa
atgtctgctttcttggcaaacactgggaggcatgcggagattgatgcttatgatgatact
attactgcttcaataaagaagattcatgagcattgtcggaggcgggctttctttcttggg
ttcagccagtctccagtagagttcattaatgctctaattgcttctcagagcagggatttg
aagcttgctgctggtgatgccagtcgtaattctgaaaaagagcatcgatctgacttttat
aatcaatcatggtttgaagatgctgttgttcactacctaaaccgcaagactgctgctgga
agtgatgctattggaagcacgattattgctcacaatcttcaacaaagaaggcagtaa
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