Malania oleifera: 131160708
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Entry
131160708 CDS
T09312
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mof
Malania oleifera
Pathway
mof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131160708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131160708
03036 Chromosome and associated proteins [BR:
mof03036
]
131160708
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131160708
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131160708
PBAF complex
131160708
GBAF(ncBAF) complex
131160708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
131160708
NCBI-ProteinID:
XP_057972551
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All DBs
Position
7:complement(109625294..109633384)
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AA seq
565 aa
AA seq
DB search
MEISTISQDPTIRPVSADDEPELDLYTIPTFSSWFSWDEIHETERIYFREFFDGSSISRT
PRVYKEYRDFIITKYREDPSRRLTFTEVRKSLVGDVSLLHKVFEFLEKWGLINFAAAPSS
GRPASESEEGEERCKVRAEDGAPHGVRVVANPNSLKPLPVPNSGGDEGGTGFGFKLPPLA
SYSDVFGELVKQKKGLVCANCGEGCQSGHYECTEGSSIICVKCFKNGNYGENMSADDFKF
NDCMENTGTSGTIWTEAENLLLLESVLKHGDDWQLVAQNVQTKTKLECISRLIEMPFGDL
MLGSFHGKNAPGGISGNMSCTQQVPLNSSESQDTAGAGDLCHEQTNECKLNGEAETHSPP
LKKKRVASLSDTDNSLMKQVARISGMFGPNIATAAAGAAVTELCEEIPFAKELFDHEEVN
VPNEVGSPSPNDEPERVLKVEDSDMKEMLPLSETREISTEKNAVPLTLRIRAAVATALGT
AAAHAKLLADQEVKEMGNLVGNIIETQLKKLQSKMKHFEDLEVVMEEEYARIGQLKEYII
EERIDVLQRTFSAGISRWRDHNVKS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggagatcagcaccatctcacaggacccgactattcgacccgtttccgccgacgacgaa
ccagagctcgacctctacaccattcctacgttctccagttggttttcgtgggacgaaatt
cacgaaacagagaggatttatttcagagagttctttgatggaagctcaatatcgagaaca
ccgagggtgtacaaggagtacagggacttcattatcaccaagtacagggaggacccatct
cggcggctcaccttcacggaggttcgcaagtctttggtgggcgacgtcagcttgctccat
aaggttttcgagttcttggagaaatggggtttgatcaatttcgctgctgctccgtccagt
ggtcgtccggcgagtgagagcgaggagggtgaggagaggtgcaaggttagggctgaggat
ggggctccgcatggggtccgggtcgtggcgaacccgaattcgttgaaaccgcttccggtg
ccgaattcaggtggggacgagggtggaaccggatttgggttcaagctaccacctttggct
tcctattcggatgtttttggtgagttggtgaagcagaagaagggattggtgtgtgcaaat
tgcggagaagggtgtcaatctggacactatgagtgtacggaggggagttctattatatgt
gttaaatgcttcaaaaatggaaattatggggagaacatgtctgctgatgatttcaagttt
aatgattgcatggaaaacactggtacttctggaaccatttggaccgaggcagagaacctg
cttcttttggaatctgtcttgaaacatggagatgattggcagcttgttgcccagaatgtt
caaacaaagactaaactagagtgtatttcaaggctcattgagatgccttttggagatctc
atgttgggttctttccatggaaagaatgcacctgggggaatcagtggcaacatgagctgc
acccaacaagttcccttaaactcatctgaatcgcaagacactgctggagcaggggatctg
tgtcatgagcaaacaaatgagtgtaagttgaatggagaagctgagactcatagtcctcct
ttaaagaaaaaacgtgttgcttcactttctgatacggataattcactgatgaaacaggta
gctcgcatctctggaatgtttggtccaaatattgcaactgctgcagctggcgctgctgtt
actgaactttgtgaggaaataccttttgcaaaagaattatttgatcatgaggaggttaat
gttccaaatgaagtagggtctccatctccaaatgatgagccagaaagggtccttaaggtt
gaagattcggatatgaaagaaatgctccctctatcagagactcgggagatatctacagag
aagaatgccgtacctcttactttgagaataagagctgcagttgcaacagctctggggaca
gctgccgctcatgccaaattgttggcagatcaggaagtcaaagagatgggaaatttagtt
ggtaacataattgaaacacagttgaagaaattgcaatctaaaatgaagcactttgaagat
ctagaggtggttatggaggaggagtatgcccgaatagggcagctgaaagagtatattata
gaagagcgaattgatgtcctgcaaagaacctttagtgctgggatatcaagatggagggat
cataatgtaaaatcttaa
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