Malania oleifera: 131161564
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Entry
131161564 CDS
T09312
Name
(RefSeq) uncharacterized protein LOC131161564 isoform X1
KO
K06100
symplekin
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131161564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131161564
03019 Messenger RNA biogenesis [BR:
mof03019
]
131161564
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131161564
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131161564
U7-dependent histone pre-mRNA processing factors
131161564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
HEAT_2
Motif
Other DBs
NCBI-GeneID:
131161564
NCBI-ProteinID:
XP_057973384
LinkDB
All DBs
Position
8:67220896..67322314
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AA seq
1336 aa
AA seq
DB search
MAGASREQALSLLAAANNHGDLAVKLSSLKQVKDILASVEPTLAAELFPYLVELQTSPES
LVRKSLIEAMEEIGTKAMEHCSILMPVLLAFLKDSDTIVARQSIVSGTNLFCLVLEEMAL
QFHRRGKIERWLEELWTWMVKFKDIIFSILLEPCSVGMRLLGVKFLETYVLLFTPDSNDS
EKNITEVKRSRRAFNISWLVGGHPILDPVALTSEANRSLSILLDLLRSASGLPGPLTITV
VNCLAAIARKRPLHYSTVLSALLDFNPSFEMGKGGHAASVMFSLRTAFLGFLRCTCPAIV
ESRDRLLRALRAMNAGDAADQVIRQVDKMIKNNERASRDARLVKDDQSSSQLPVLGDHLK
KRPMFQDNEEPTNGHEVASKKIRYGLNNHLVVPVQLSDLGQDNSPANGLSSKAPLLDSDL
TPVEQMIAMIGALLAEGERGAESLEILISNIHPDLLADIVITNMKHLPKTPPPLIRLGNL
PVTCQTDTSSSPAQAVASTASTVSLQSSVFTAQVSSSSATMIGAPLPDLPAIVNADAKRD
PRRDPRRLDPRRVAVPTEAPSTPIVEDSDTGAEIDGSLSSSKPLPSDAVASVENISLSLI
TKTKSDDEILESTVASMTDQQTLEEEVMDGAMEVASSPEIATSDHALSPVCTVDDVLAPK
PSDITVTDGADALSLLESDQHSPSVSSTSASEETCHDLPLLPSYVGLTEEQKITVRKLAF
ERIIDSCKHLQRTDYSQTRMALLARLIAQMAVDEDVIVMLQKHILLDYRHQKGHELVLQV
LYHLHALTITDSVEHSKFASVLYEKFLLAVAKSLLDNLPASDKSFSRLFGEVPLLPDSAL
KLLDDLCYADVYDHSGKEIRDVDRVTQGLGAVWSLILGRPPYRQSCLNIALKCTVHPQDE
IRSKSIRLVANKLYLLSFITENIEQFATSTLLSAVDQHVSEIEVLQAGSEQRTEGEVSIQ
ETSISGSQISEPGTSENDSMRGAQPIIGSVSNMVSRKAQCLISLYFALCTKKASLLQLVF
NTYGRAPKTVKQAFGRHIPILVRALGSSCSELLRIISDPPQGSENLLSQVLQVLTEGTTP
SSDLIAIVKHLYETKLKDATILIPMLSSLSKNEVLPIFPRLIDLPLEKFQLALARILQGS
AHTGPALTPAEVLVAIHDINPEKDGLPLKKITDACSACFEQRTVFTQQVLAKALNQMVDQ
TPLPLLFMRTVIQAIDAFPTLVNFVMEILSKLVSRQVWKMPKLWVGFLKCVSQTQPHSFH
VLLQLPPPQLESALNKHANLRGPLAAYAGQPSIRSSLPRSILVVLGLVNESHLQQPQLAS
SLRPSDTSSVHGATPT
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcttccagagagcaggctctctctctcctcgccgccgcgaacaaccatggc
gatttggccgtcaagctgtcttctctgaaacaggtcaaggatattctcgcgtccgtcgag
cctactctcgccgctgagcttttcccctatttggtcgaactccagacctcgccggaaagt
ctcgttagaaagtctcttatcgaggcaatggaagagattgggactaaagcaatggagcat
tgttctatactaatgcctgtattattggcgtttttaaaagatagtgatactattgttgca
aggcaatccattgttagtggcacaaatttgttctgccttgttctggaggagatggcattg
cagtttcaccggcgtggtaaaattgagaggtggcttgaggagctttggacgtggatggtt
aagtttaaggacattattttttctattctactggagccttgttctgttggcatgagattg
ctgggggtgaaatttttggaaacatatgttttactttttactccagacagcaacgactct
gaaaaaaatatcacagaagttaaaagaagtagacgggcttttaatatttcatggctggtt
ggtggccacccaattctggatccagttgcactgacgtcagaggcaaataggtctcttagc
attcttttggacttgttgcgatcagctagcggccttcctggtcctttgacaattactgtt
gtcaactgtcttgcagccatagcaaggaagaggccactccactatagtactgttctttct
gcattgcttgattttaatccaagctttgagatggggaagggaggtcatgctgccagtgtc
atgttttccttaagaactgcctttttaggatttctaagatgtacttgtcctgccattgta
gagtcaagagatagattgcttagggctttgcgggcaatgaatgctggagatgcagctgat
caagttattcggcaagttgataaaatgataaaaaacaatgagcgtgcttctcgtgatgct
cgattggtcaaggatgatcaatcatctagccagctgcctgttttgggggatcatttgaaa
aaaaggcctatgtttcaggataatgaagagccaactaatggtcatgaggtggcttctaaa
aaaattcgttatggtcttaacaaccatttggttgtgccagttcagttgagtgatttgggg
caggataattcgccggctaatggactatcctctaaggctcctttgttggatagtgatttg
actcctgttgagcaaatgattgccatgattggagctttacttgcagaaggagaaagaggt
gctgaatcacttgaaattctaatttcgaatatccatcctgatctcttggctgatattgtc
ataactaacatgaagcatttgccaaagacccccccaccattaataagacttgggaatttg
ccagtaacttgtcaaactgatacttcaagtagtccagcacaggctgtggcatcgactgct
tcaactgtgtctctgcagtcttcagttttcacagcacaagtatcttcttcgtcagccact
atgatcggcgcaccattacctgatttacctgctattgtcaatgcagatgctaaacgtgat
ccacgaagggatccccgtcggttggatccgcgacgtgtggcagtacccacggaagcacct
tccactcctatcgtggaagattctgatactggtgctgagattgatggttctctttcttca
agtaaacctcttccatctgatgcagtggcaagtgttgaaaatatttcactatctttgata
accaaaaccaaaagtgatgatgagattttagaaagtacagtggcctctatgaccgatcaa
caaactttggaagaggaagttatggatggagccatggaagttgcatcaagtccagagatt
gctacttcagatcatgctctttctcctgtttgcacagtagatgatgtacttgccccaaag
ccatcagatattacagttacagatggggctgatgcattatctttgctagaatcggatcag
cattctccttctgtttcaagcacatctgcatctgaagagacttgtcatgatttacctctg
cttccatcatatgttggactgacagaagagcagaaaataactgtgagaaaattggcgttc
gaacggattattgactcatgcaagcatttacagaggacagattatagccagacacgcatg
gcattacttgcccgtttaattgcacagatggctgttgatgaggatgtgattgtcatgctg
caaaaacatattctcttagattatcgacaccaaaaggggcatgaacttgtattgcaagtc
ctgtaccacctgcatgctttgacaatcacagattcagtcgagcattctaaatttgcttct
gttctgtatgaaaagttcctcctggctgtggcaaagtcattgctggacaatttacctgcc
tcagacaagtcttttagcagactttttggtgaagttcctcttttgccagactctgccttg
aagttgctggatgatctttgctatgctgacgtttacgatcacagtggaaaagaaattcgt
gatgttgatcgagtaactcaaggacttggtgccgtgtggagcttgattttggggcgtcca
ccttatcggcaatcctgcttgaatatcgctttgaagtgcactgttcatccacaagatgaa
attcgatcaaaatctatccggctggtggctaacaagctataccttcttagtttcattaca
gagaacattgagcaatttgcaacaagtacattattgtcagctgttgatcagcatgtttcg
gagatagaggtgttgcaagctggctctgagcaaagaacagagggggaggttagtatccag
gaaacctcaatcagtggttctcaaatttcagagcctggaacctctgaaaatgactccatg
agaggtgcacaacccattattgggagtgtttcgaacatggtctctcgtaaagctcaatgc
cttatttctttatattttgctttatgcacaaagaaggctagtcttcttcaacttgtcttc
aatacttatgggcgagctcctaagactgttaagcaggcctttggtcgccatatccctatt
cttgtaagggccctagggtcgtcatgttctgaattgctccgtataatatctgatccaccc
caaggaagtgaaaatcttctgtcacaggtgctgcaagtattaacggaagggacgacacct
tcttctgatctgattgcaatcgttaaacatttatatgaaactaagttgaaggatgctacg
attcttatcccaatgttgtcatcactttccaaaaatgaggtgttacctattttcccacga
ctaattgaccttccattagagaagttccagcttgctcttgctcgcatattacagggctca
gctcatacaggcccagctttgacgcctgcagaagttttggttgcaatccatgacattaat
cctgagaaagatggccttcctctcaagaagattacagatgcttgctcagcttgttttgag
caacgtacagtcttcacgcagcaggtcttggcgaaggccttgaaccagatggttgatcaa
actcctcttcctctactcttcatgagaacagttattcaggcaattgatgcctttcctaca
ctggttaattttgttatggagatactgtccaaacttgtgagtagacaggtatggaaaatg
ccaaagttgtgggttgggtttttgaaatgcgtatcccagacacagccacattctttccat
gtgttgctgcagttacctcctccacagcttgaaagtgctttgaacaaacatgctaacctc
agaggtccccttgctgcttatgctggccagccgagtataagaagttcactacctaggtca
atacttgtagttcttggcctcgtaaatgaatcacatctgcaacaaccacagcttgcatcc
tctttgcgtccttcagacacgagttctgttcatggagcaactcctacataa
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