KEGG   Malania oleifera: 131162033
Entry
131162033         CDS       T09312                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
mof  Malania oleifera
Brite
KEGG Orthology (KO) [BR:mof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mof03009]
    131162033
Ribosome biogenesis [BR:mof03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    131162033
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd WDR54 Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_BBS7 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 131162033
NCBI-ProteinID: XP_057974115
LinkDB
Position
8:85788829..85816306
AA seq 444 aa
MEVVIASSSIDAGISCWDLHTGVEQLRYRSCASPPHGLLCIAQRFLASSQLRDSPSSSGS
ILYWSWHKPQVGVKSFPAEAINPLVSNHDGTYIIGGGVSGHIYLWEVATGRLLKRWHGHY
RAVSCLVLSDDESLLISGADDGCVRVWSLFMIFDDLRREEAKHLYEHSFSEHTLRVTDIV
TGYGGSNAIIVSASEDRTCKVWSLSKGRLLRNILFPSIIDAIALDPGEHVFYAGGRDGKI
YIAALNVESTSSSKYGMHIIGSLFDHSKAITCLAFGMDGVLLVSGSEDGMIRVWDTKMRN
IIRIFKHSKAPINNVLVVRRPCSSNSQVSQASLGRRQGSFLPPPLGKYANSSDENIEIEA
VIAPKEAFDKPMDAAYLSAYMMNNQMKELQQLGSAAAVEVENERLQFDCRKSMQMVEQWK
RMYENLHEFCVNELLDGNQTGGSC
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggaagtggtgatagcatcatcttcaattgatgccggcatcagttgctgggacctgcac
acaggtgtagagcagctccgctaccgatcttgtgcctctcctcctcatggcctcctctgc
attgcccaacgcttcctcgcctcctcacaactccgcgattccccctcctcctctggatcc
attctctactggtcttggcacaagcctcaagtaggagttaagagttttcctgcagaagcg
atcaatccacttgtatcaaaccatgatggcacatatattattggtggaggtgtatctggg
catatttacttgtgggaagttgcaaccggtagactgctaaagaggtggcatggacattat
agggctgtttcttgcttagtattatctgatgatgaatctcttttgatttctggggcggac
gatggatgcgttagggtctggtcccttttcatgatatttgatgatctacgaagagaggaa
gcaaaacatctctatgaacacagcttctctgagcacacattgcgagttactgatattgtt
acaggttatggaggaagcaatgcaattattgtgtcagcttccgaggatcggacatgtaag
gtttggagcttatcgaaggggaggttattaagaaatattttatttccttcaataattgat
gcaattgcattggatcctggtgaacatgtcttttatgctggtggaagagatggcaagata
tacattgctgcacttaatgttgaaagcacctctagtagcaagtatgggatgcatatcatt
ggttcgttatttgatcacagcaaggctattacttgcttagcatttggtatggatggagtt
ttattggtttctggctcagaggatggcatgattcgtgtttgggatactaaaatgcgcaac
attattcgcatattcaaacattcgaaagctcccattaacaatgttctcgttgtaagaaga
ccctgttcctcaaattcccaggtgtcacaagcatccctaggaagaaggcaggggtcattt
ttaccacctcccttgggaaaatatgcaaattcatctgacgaaaacatagagatagaggct
gttattgcaccgaaggaagcttttgataagccaatggatgctgcatacctcagtgcatac
atgatgaataatcaaatgaaagagcttcagcaactaggttctgctgctgctgttgaagtg
gagaatgagagacttcagtttgactgtagaaagtctatgcaaatggttgaacagtggaag
agaatgtatgaaaacttgcatgaattttgtgtgaatgagcttttggatggaaatcaaaca
ggaggctcctgttga

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