KEGG   Malania oleifera: 131162383
Entry
131162383         CDS       T09312                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
mof  Malania oleifera
Pathway
mof03022  Basal transcription factors
mof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131162383
  09124 Replication and repair
   03420 Nucleotide excision repair
    131162383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mof03021]
    131162383
   03400 DNA repair and recombination proteins [BR:mof03400]
    131162383
Transcription machinery [BR:mof03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     131162383
DNA repair and recombination proteins [BR:mof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     131162383
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 131162383
NCBI-ProteinID: XP_057974786
LinkDB
Position
8:complement(27053188..27127314)
AA seq 361 aa
MASVPSKLYSDDVSLLMVLLDTNPFFWSSPNTSLSFSNFLSNVLSFLNSILLLNQFNQVV
VIATGVNSCGCIYDSSSALATDQSSENGRMPALCSKLLQKLEEFVIRDEQLNKEDSVDGT
CSSLMSGSLSMALCYIQRVFRSGPLHPQPRILCLQCSPDGPEQYVAVMNAIFSAQRSMVP
IDSCVIGAQHSAFLQQASYITGGVYLKPQLLDGLFQYLTTVFATDLHSRRFLQLPRPVGV
DFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGVWKESRWVSIVDVCIVCCLVGIW
LERNARIFTGQPLVRPNLRQQIRREKPQKHNLNLRSQCSCCSAYWYKLHRLETTVVMSSC
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgtcggtcccttccaagctctattcagatgacgttagtctcctcatggtcttgctc
gacaccaatcctttcttctggagttcacctaacacttctctctctttctccaactttctc
tctaatgttctgtcgtttcttaattcaattctcctcctcaaccagttcaaccaggtggtt
gtaatcgccaccggggtaaattcttgcggctgcatatatgattcatcttcggccttggcc
actgatcagagttcggaaaatggacgaatgcctgctctttgttccaaattattacagaaa
ttggaggaatttgtgattagggatgagcaattgaacaaggaagattcagttgacgggact
tgttcttcgcttatgtctgggtctttgtcgatggctctctgttatatacaaagagtgttt
cggtcagggccgcttcatccccaacctcgaattttatgcttgcagtgttccccagacggc
cctgaacaatacgttgcagttatgaatgcaatattctcagcgcagcgttccatggtccct
atagactcttgtgttataggcgcccagcattctgcctttttgcaacaggcttcgtacata
acaggtggtgtgtatttaaagccccagctattggatggcctgtttcaatatctcacgact
gtatttgcaactgatttgcactctcgcagatttttacaacttccaaggcctgtaggggtg
gatttccgtgcctcgtgtttctgccataaaaatacaattgacatgggctacatatgctct
gtttgcttgtctatattctgtaagcatcacaagaaatgttcaacctgtggggtttggaag
gagtcgagatgggttagcattgtggacgtgtgcattgtttgctgtcttgtcggtatttgg
ctggagaggaatgctcgtatcttcacgggtcaacctttggtcaggcccaatcttcggcag
cagataagaagagaaaaaccccagaaacataatcttaatttaagaagtcagtgttcatgc
tgctctgcttattggtacaaattgcaccgactggaaacaactgtggttatgagtagctgc
ttgtag

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