Malania oleifera: 131162480
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Entry
131162480 CDS
T09312
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mof03036
]
131162480
03400 DNA repair and recombination proteins [BR:
mof03400
]
131162480
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
131162480
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
131162480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_DNAAF5
HEAT_GCN1_C
HEAT_GCN1
Cnd1
Motif
Other DBs
NCBI-GeneID:
131162480
NCBI-ProteinID:
XP_057974991
LinkDB
All DBs
Position
8:complement(27920670..28058430)
Genome browser
AA seq
1426 aa
AA seq
DB search
MGVSPAQLVSDIGNRLAQDSRPNKDFLVKSLRQAASALSELDQSSSLKSAIRPLSASLVK
RVLLQHKDKDVRLLMAICLSEIIRILAPEPPFSDNILRDIFKLIACVFSELADTTSPYFS
RRVKILETIAELKFCFQMLDIGCDDLVLEMFNIFFSVVREHHPQGVINAILSIMTLILKE
EVSQPLLEVIFRNLLKEGKGAPPASSHLAISVIKNCTEELEPFVRGFLTSCILDKDAVGS
ELKDFYHEIIFEIFQCAPQMLLAVIPNLTQELLTEQVDVRIKAVNLIGKLFALPECHAAH
EYHHLFVEFLKRFYDKSAEVRLNALQCANACYMANPSGTKSLEVLTALEGRLLDFDDRVR
TQAVTIACDLVRSNLKYVPPDLISRAAERLRDKKISVRKNALQKLLEVYRDYCTMCSEGH
MTISDHFEQIPCRILMLCYDKDCKEFRPQNLEFVLSEELFPPSLSVMERTRHWIYLFLLF
NPAHMKALNSILSQKRRLQTEMQNYLALRKKEKLLQESGSEKVQNLIKTSLKKMSVSFPD
PCAAEECFHKLTQVKDNNLFNALAQLLDEPKIINAGNIRDKFVKMIGDKHPQSDFLRSLS
IKCSFSIFNSEHVSCVLDHICGGRFEDKHLEAPSFSILLVIVSVFPSLLRDSEKQFQELL
EENPFNEKLIQILAKVGSYTSIKLSDIYPSLERVCLEGTRAQSKLAISAIAGLGSGSEQS
VFSELFEKVVIYLHAGKNIPTILQSLGCIAQHSVLAFHMRDQEITQYIKEKIFQVNNVEQ
SFDLASFGESSCKLKIYALKTLVKSFLPYQGTPDRCQVMVLLEILSNMLKKGDVFDGTIS
CETDEANIKLAAAKSVLRLSRRWDFHISPKIFHSTVLMAKYSMPFVRRLFLDKTHKLLRE
RAMPSKYACAFALAASDSLKDLQNDSLKYMAEFIRERGKEARIHHSSGKQGEPITDYPAY
IVVYLIHVLAHDKGFPAENCMDEEIYAQFCSPLFFALWALVNSSSVDGDVDLVKDNASHL
LIIFRAIKRAEDAVNSLSTTKLHVLADIGIAIVHSLNHYGIPSSHAPGVILLPSSLYRND
LSKTSGEDSSRCSTQSATDESFVKGVVNILELRLSQPTSTIVKRGRNCQGDSLQVDVASY
RTLNSSLCKKINLSMNETQEEGKNEFARGTASHNSMQQGISTKGRRKKVPFPSAPGSIGL
HNSSSMLFERRNGTSVNSELVLEKEQLQSSCDSVTTMPSLMESQVLSQKFDLTSSSSLKE
NSGPRKCSKNTNDHSKCGGAECKNCCRSKETIEKNAASVGQQIKLLSPGDNSFYSGAEGF
DSQNNTHKDAVFAETSKKFCSLHRDPLENSSFSSQEENIHIFGDDIPQEQQQQQKTLPNE
GRNFSNRKIPLPAKGKKGLRVSVDASLSEVVNTNDVIARRTRSRKV
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtctctccggcgcaactagtctccgatatcggcaaccgacttgcccaggattct
cgtccaaacaaggattttctcgtcaaatccctccgacaagcagcaagtgctttgtcagaa
ttagatcaatcgtcatcactgaaatctgccataagacccttgagtgcctctttggtgaag
cgtgttctgcttcagcataaagataaagatgtcaggcttttaatggccatatgcttaagt
gaaattattcgtattctggcacctgaaccaccgtttagtgataacatattaagggacatt
tttaaacttattgcgtgtgtgttttctgagctggctgataccacgagcccttatttctcg
aggagagttaaaatattagagactattgctgagctgaaattttgttttcaaatgctggat
attggctgcgatgatctagttcttgagatgtttaatattttcttctcagtcgtgagggaa
catcatccacaaggcgtaattaatgcaattttgtctataatgacactcattctaaaggag
gaagtttctcagccactcttggaggtgatttttcggaatctcctgaaggagggaaagggt
gcacctcctgcgtcttcacatcttgcaatttctgtcattaaaaattgcactgaagagctg
gaaccttttgttcgtgggtttttaacatcttgcattttagacaaagatgctgtaggaagt
gagcttaaagacttttaccatgaaattatttttgaaattttccaatgtgcacctcagatg
cttcttgctgtcatccctaatctaactcaagaattactgactgaacaagttgatgtccga
ataaaggctgttaatttaattggtaaactttttgcactgcctgaatgccatgctgcacat
gaatatcaccatctttttgtggagtttttgaaaagattctatgacaaatcggcagaagtt
agacttaatgctttacaatgtgccaatgcttgctatatggctaatccatctggaacaaaa
tcacttgaagttctgactgcacttgaaggccgactactagattttgatgatagagtgaga
acacaggctgtaaccattgcttgtgatcttgtcagatccaatctgaaatatgttccacct
gatttaatatctcgagctgctgaacgactccgtgataagaagatatctgttagaaagaat
gctctgcagaagttactggaagtatatcgagattattgtacaatgtgttctgaaggccac
atgacaattagtgaccattttgaacaaattccttgtagaattttaatgctgtgctatgat
aaagattgtaaggagttcaggcctcaaaacttggagtttgtgctttcagaagagttattt
ccaccttctctttcagtcatggagaggacaaggcactggatctatttgttcttgctcttt
aatcctgctcatatgaaggcattgaactctattttatctcaaaaacggaggttgcaaact
gagatgcagaattatttagctctcagaaaaaaggaaaagttgttgcaggaaagtggttct
gaaaaagtacaaaatcttattaaaacttcattgaagaaaatgtcagtatcctttccagat
ccttgcgcagcagaggaatgcttccataagttgactcaagtgaaagataataaccttttc
aacgcattggcgcaattgttagatgaaccaaaaatcataaatgcggggaatatcagagat
aaatttgtaaaaatgataggggacaagcatccgcagtctgattttttgcgatcactctca
ataaaatgttcatttagtatattcaactctgagcatgttagctgtgttttagatcatatc
tgtggaggcagatttgaagataagcacttagaggcaccgtctttcagcattcttctggtt
attgttagtgtcttcccttctctcttgagagattctgagaagcagtttcaagagttattg
gaggagaacccattcaatgaaaagctgattcaaatattggcaaaagtaggctcttatact
tctataaaactaagtgatatttacccttccttggaaagggtatgcctagagggtactcgc
gctcagtccaaattagctatttctgcaattgctggattagggagtggttcagagcaatct
gtattctctgaattgtttgagaaagttgtgatttatctgcatgctgggaagaatatacca
accatcttgcagtctttgggctgtattgcacaacattctgttttggcatttcacatgcga
gatcaagagattacacagtatataaaggagaaaatttttcaagtgaataatgtggaacaa
tcattcgatctagcttcatttggagagagttcttgcaagctgaagatttatgctctgaaa
actcttgtcaagagttttttgccatatcaaggaactcctgataggtgtcaagttatggta
ttgctggaaattttgtcaaatatgctgaaaaagggtgatgtttttgatggtaccatctca
tgtgaaactgacgaggctaacatcaaattagctgctgcaaagtctgtcctccggctgtct
agaagatgggattttcacattagtcccaaaatctttcactctactgttctgatggctaag
tactccatgcccttcgtaaggagattgtttctggataaaacacacaagctattgagagag
cgcgcaatgcctagtaaatatgcatgtgcttttgcattggctgcctcagattccctcaaa
gatctgcaaaatgattcactgaaatatatggcagaattcataagggaacgtggtaaagaa
gcccgaatccaccattcctctgggaagcaaggtgaaccaattactgattacccagcatac
attgtggtgtacttgatccacgttcttgctcatgataaaggcttcccagctgaaaattgc
atggatgaagaaatctatgctcagttttgcagtccactgttttttgctttatgggcccta
gtcaattctagttctgttgatggtgatgtggatctggttaaagacaacgcctcgcattta
cttattattttccgtgccataaaacgggctgaggatgctgttaattctcttagcacaacc
aagctgcacgttttagcagatataggaattgccatcgtacatagtttaaatcattatgga
attccatcatcacatgcccctggggtgattttgctcccttcatcgttgtatagaaatgat
ctttccaaaacaagtggggaggatagttcaagatgctctactcaatctgctactgatgaa
agctttgttaagggggttgttaatattcttgaacttcggctgtctcagcctacgagtacc
attgttaaacgtggccgaaattgtcaaggggatagtttgcaggtagatgtggcatcctat
agaacactgaactcatcattgtgcaagaagatcaatttgtcaatgaatgaaacacaggaa
gaaggcaagaatgagtttgctcgtggaactgcttcccataattctatgcagcagggaatc
agcacaaaaggaagacgaaagaaggttccttttccttctgctcctggatcaattggtttg
cataacagcagttctatgctttttgagcgcagaaatggtacatctgtaaattctgagttg
gtgctggagaaagaacaacttcagtcttcttgtgattctgtgactacaatgccttctctg
atggagtcacaagtcttgtctcagaaatttgatttaacttcttcttcttcattgaaagaa
aacagcggtcctaggaaatgtagcaagaatacaaacgatcattccaaatgtggtggagct
gagtgtaaaaattgttgcaggtcgaaggaaacaatagagaaaaatgcagcttcagttggg
cagcagatcaagttattgtcccctggagataatagtttctattctggcgctgaggggttt
gattctcaaaacaatactcacaaggatgctgtattcgcagagacttcaaagaaattctgt
tcgctgcatcgggatcctttggagaattcttctttcagtagtcaagaggaaaatattcat
atttttggagatgatattccacaagaacaacaacaacaacaaaaaaccttaccaaacgag
gggagaaatttttctaatagaaaaattcctttacctgcaaagggaaagaaagggctgaga
gtttctgttgatgcatcattgtcggaagttgtcaatacgaatgatgttattgctcgaaga
acccgaagccgaaaagtatag
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