Malania oleifera: 131162958
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Entry
131162958 CDS
T09312
Name
(RefSeq) SWI/SNF complex subunit SWI3B isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mof
Malania oleifera
Pathway
mof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131162958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131162958
03036 Chromosome and associated proteins [BR:
mof03036
]
131162958
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131162958
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131162958
PBAF complex
131162958
GBAF(ncBAF) complex
131162958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_1
Methyltransf_30
Motif
Other DBs
NCBI-GeneID:
131162958
NCBI-ProteinID:
XP_057975579
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Position
8:complement(108366063..108370679)
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AA seq
560 aa
AA seq
DB search
MSTSSPVKDPGGPSTETPAAAAPQPEPEASPNPLTTPIAKSDTPPADLKETPVAATPASK
ETPVAATPASKETPVAASSVPSIPPPSIQHDVIIPSYSRWFSWNNIHDCEKRFLPEFFDG
RSPSKNPKLYKYYRNSIVRAFRENPTIKITFTEVRKTIVGDVGSIRRLFDFLEGWGLINY
SGTALKQPLKWEEKESKSSQEGSSLESSVPNRVASKKLCSGCKSLCNIACFACDKYDLTL
CARCYVRGNYRVGVNSSDFRRVEISEDAKTNWTDVETLRLLEAIMHHGDNWKKVAEHVGG
RSEKDCVARFIKLPFGEQFVGDAESAEVYNNFYQMKDQSETESGLETIGKSSPTKRMRLT
PLADASNPIMAQAAFLSALAGEEVAKAATKAAVTALSEATSRENLHSIANDSRQQEADAA
SNLETTVLERTHADANSLHKKEELEVERKISDIVEVKVCSLCRTPSHRCPCILYKYELFA
KRCWWGKRKIPISWGQLVQMKEIWDKIVHFEELDLQMEKEWQQLQNLRNLLFGDQLTLLF
HKSGVPKTGEPGREENVRTD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagttcaccggtaaaagatcccggcggaccctcaacagaaacgcccgccgca
gcggcccctcagcctgagcctgaggcctccccgaatcccctcaccactcccattgcaaag
tcagacactccaccggcggatttaaaagaaaccccagtcgccgctacgccggcttcgaaa
gaaaccccagtcgccgctacaccggcttcaaaagaaacccccgtcgccgcctcttccgtc
ccatctataccaccaccgtccatccaacacgatgttattattcccagctattcacgatgg
ttttcgtggaacaacatccacgactgcgagaaaagattcctcccggagttcttcgacgga
aggtcgccttccaaaaaccctaagctttacaagtactaccggaactccatagtcagggcg
ttcagagaaaaccctacgatcaagatcacttttacggaggtgcggaagacgatcgttgga
gacgtcggctcgatccgtaggcttttcgattttctcgagggttggggcttgattaattac
tcaggaacagcattgaagcagccgctgaagtgggaagaaaaagagagtaagtcttcgcag
gaagggagttcacttgaatcttcagtcccgaatcgagtggcttcgaagaaattgtgcagc
ggctgcaaatcactctgtaatatcgcttgctttgcttgtgacaagtatgacttgactctt
tgtgcgaggtgctacgttcgtggcaactatcgagttggtgttaattcttctgattttaga
cgggttgaaattagtgaagatgcaaagacgaattggactgatgtagaaactttgcgtctc
ctggaagccatcatgcatcatggtgataactggaagaaggttgcagagcacgttggcggt
aggagtgagaaggattgtgttgctcgtttcatcaagcttccttttggggagcaatttgtg
ggggatgctgaatctgcggaggtttataacaatttttatcaaatgaaggaccagagcgag
accgaatctggattggaaactattggcaaatcatccccaacaaaaagaatgcgtctcaca
ccacttgctgatgcaagtaacccaattatggcacaggcagctttcctctctgctttggct
ggtgaagaggttgcaaaggcagctactaaagcagctgttacagctttgtccgaggcaaca
agtagagagaatcttcattccattgcaaacgattcaagacagcaagaggcagatgctgca
tcaaatttggagaccactgtgttagaaagaactcacgcggatgcaaattccctgcacaag
aaggaagagctggaggtagaaaggaaaatttccgacattgttgaagtcaaggtgtgtagt
ctgtgtagaactccatctcatcggtgtccttgcattttgtataaatatgaattatttgct
aaacgatgctggtggggaaaacggaaaattcccatttcttggggacaacttgtgcagatg
aaggagatttgggacaagatagttcatttcgaggagttggatttgcagatggagaaagag
tggcaacaattgcagaatctaaggaacctgctctttggtgatcaacttacccttttgttt
cataaaagcggtgtaccaaaaactggggaacctgggagggaggagaatgttagaacggat
tga
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