Malania oleifera: 131163077
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Entry
131163077 CDS
T09312
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
mof
Malania oleifera
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mof03009
]
131163077
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131163077
Ribosome biogenesis [BR:
mof03009
]
Eukaryotic type
Pre-60S particles
Helicases
131163077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
131163077
NCBI-ProteinID:
XP_057975764
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All DBs
Position
8:4866061..4903833
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AA seq
789 aa
AA seq
DB search
MADGGTTLQVSSKAELKRREKQKKKAKSGGFESMDLSPNVYRGIKRKGYRVPTPIQRKTI
PLILRGSDVVAMARTGSGKTAAFILPMLHRLQQHVPQVGVRALILSPTRDLALQTLKFTE
ELGKFTDLRTSLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVDDMSLRSVEYVVF
DEADSLFGMGFADQLRKILSQLSENRQTLLCSATLPSALAEFTKAGLRDPMVVRLDLETK
ISPDLKVSFFTLREEEKHAALLYLVREHISSDQQTLIFVSTKHHVEFLHILFRKEGIEPS
VCYGDMDQDARKIHISRFRARKTMLLIVTDVAARGIDIPLLDNVVNWDFPPKPKIFVHRV
GRAARAGRTGTAFSFVTSKDMPYLLDLHLFLSKPIRAAPTEEVVLKDMDGVMSKIDQAVA
NGETVYGRFPQTVIDLVSDRVREIVDSSTELTCLRKTCINAFHLYSKTKPSPSRASMCRA
KDLPREGLHPFFKNVLGGSELTALAFSEQLKAFRPKQTILEAEGDAAKSKHLQGPSSQWA
DVMKKKRAIHEEIINLVHHQRCNNHVAEEANSEKTSSEEKERKEVGGSKRRANSFKDEEY
FISSVPTNQHLEAGLSVRANEGFGSNRLEAAVLDLVADDSEGLQKQKSMHHWDKRSKKFI
KLNSGERVTATGKIKTESGSKVKANKTGIYKKWKERSHNKISLKGTVNDQNGENPTQGDR
QLYGGGRKFRGNKKHCSIPNANVRSEIRDLDQVRKERQKKASRISYMKKNNSKKGKKFSK
NRKQGKQSR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgggggaaccactctgcaagtgagctccaaagcggagctcaaacgaagagag
aagcagaagaagaaggccaagtctggagggtttgagtccatggacttgagccctaatgtc
tacagaggtatcaagcgtaagggctacagagtgcccacccctatccagcgtaagaccata
cccctcatactcagaggaagcgacgtcgtcgccatggcccgtacgggctccgggaagact
gccgccttcattttgccaatgctccaccggcttcagcagcacgtgccccaagtcggagtt
agggctctcattttgtctcctactagagacttggctttgcagaccttaaaattcaccgaa
gagctcgggaaattcaccgatcttcgcaccagtttgctagttggaggtgatagcatggaa
agccagtttgaagaattagcgcagaatcctgatattataattgcaacccctggtagactc
atgcatcatttgtctgaggtcgacgacatgtcattgcgttcagttgaatatgttgttttt
gatgaagctgatagcctatttggcatgggttttgcggatcagttgcgtaaaattctttct
caactaagcgaaaaccgtcaaacattactttgtagtgcaactttacctagtgcccttgct
gagttcaccaaggctggattacgggatcccatggttgtgcggcttgatttagagacaaag
attagtcctgatttgaaggtttcctttttcaccttgcgtgaagaagagaaacacgcagca
ttgctatatttggtaagggagcatatcagttccgatcaacagacattgatatttgtttcc
acaaaacatcatgtggagttcttacatattctttttagaaaagagggtatagaaccttct
gtctgttatggtgatatggatcaagatgctcgtaagattcatatatcaaggtttagggca
aggaaaactatgttgctgattgtgactgatgttgcagctagaggcattgacattccgttg
cttgataatgttgtcaattgggacttcccccccaaaccaaaaatttttgtccatcgagta
ggacgagctgcaagggctggtcgtacaggcactgcattttcttttgtgacttctaaggat
atgccataccttctagaccttcatctttttctctccaagccaattagagctgctcccact
gaggaggtggtcttgaaagatatggatggagtaatgtccaaaattgatcaagcagttgca
aatggagaaactgtttatggacgttttccccagacagttattgatcttgtttcagataga
gttcgggaaattgttgattcatctacagaactgacttgtttacggaaaacctgtataaat
gcatttcacttgtattcaaaaacaaaaccctcaccttcacgggcatccatgtgcagagca
aaagatttaccccgcgaagggttgcatccattttttaaaaatgtactgggtggcagtgaa
ttaacggcattagctttttctgaacaattgaaagctttcagacccaagcagaccatattg
gaagccgaaggtgatgctgctaaatcaaagcatctgcaaggtccttctagtcagtgggct
gatgtgatgaagaagaaaagagccatccatgaggagattatcaatttagtccatcatcaa
cgctgtaacaatcatgtggcagaggaagccaattctgaaaagacatcttcagaggaaaag
gaaagaaaagaagttggtgggtctaaacgaagggctaatagcttcaaggatgaggagtac
ttcataagttcggtgccaacaaatcaacatttggaggctggactctcagttagagctaac
gaaggctttggttcaaacaggttggaagctgctgttctggatctggttgcagatgatagt
gagggcctgcagaaacaaaagtccatgcatcattgggataagcggagtaaaaagttcatc
aagttgaacagcggtgaacgtgtaactgcaactggaaagataaagacggagagtggctcc
aaagtaaaagctaacaaaactggaatatacaagaaatggaaggagaggtcacacaacaaa
atctctctcaaaggaacagttaatgatcaaaatggtgaaaaccctacacaaggtgatcgt
caattatatggaggtggcagaaagttcagaggaaacaagaagcattgctccattccgaat
gccaatgtgcgttctgaaattagagatcttgaccaagttcgcaaggaaaggcagaagaag
gcaagcagaatctcctacatgaagaagaacaactctaagaagggaaaaaagttttctaaa
aataggaaacaaggaaaacaaagtaggtga
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