Malania oleifera: 131164260
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Entry
131164260 CDS
T09312
Name
(RefSeq) polyadenylate-binding protein 6-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131164260
09123 Folding, sorting and degradation
03018 RNA degradation
131164260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131164260
03041 Spliceosome [BR:
mof03041
]
131164260
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131164260
mRNA cycle factors
Stress granule specific factors
131164260
Spliceosome [BR:
mof03041
]
Complex C
Other components
Complex C specific factors
131164260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RBD_DEAH11
RRM_RdRP1_2
RRM_MARF1
CHDII_SANT-like
Motif
Other DBs
NCBI-GeneID:
131164260
NCBI-ProteinID:
XP_057977293
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All DBs
Position
9:80864252..80868939
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AA seq
627 aa
AA seq
DB search
MPALVAQPPPPPPAATLQPSHPPQNCSLYVGDLDPEVTEVDLEKAFSEVGLAPSVSLCKD
LVSRKSLCYAYLNFGSHSDAAKALACLNHTKLKGKPMRMMWSQRDPLSRKTGIGNLFIKN
LDPSVTSACLQGIFCNFGTILSCKVAEENGKSKGFGFVQFDSEQSATAALNALHDSMLEG
KKLHVSKFVKKSERKAAIEEKTFTNLYVKHLCEDWTEDILRDKFSEFGKVCSVAIMKDGA
GKSRGFGFINFELPEEAKKAVEALNGVPLGSKNLFVGRAQKKAEREELLKRERELMLKCH
TEKSKASNLYVKNIDVSVDDNKLREHFSGCGQVLSAKVMCSDNGMSKGFGFVSFSSPEEA
KRALDTLHGTSFQGRSLYVAIAQRREDRRRMLQSHYAQNNSVPSLFPSSQDYLSLRSRSP
GCILPPCPPSLLSHMNSYQPIMYQPFCRNMGGLYPSATQSCQPHYPTYIPMRQTQQGNPR
EWVYHPHSMAYTNSSAPIQDFNRGNPGGQKFGSRKQGKIRGGPAEASSKGPAATARSTTA
ASSPGSCKNIGELLHPLVENLQPNCAAKITGMLLEMNNSDVIKLLKSPKTLAAHVEKAVQ
VLKETNSSTGADAATGLPVKSARCLNY
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgccggcactagtggcgcagccaccgcccccgccacctgcagcgacgctgcagccgtct
catcctccgcagaattgctcgctgtacgtgggagatctggacccagaagtgacggaggtg
gaccttgagaaagcatttagcgaagtgggtttggcaccatctgttagcctctgcaaggac
ctcgtgtcgaggaaatctctgtgttacgcttacctcaacttcggctctcactccgatgct
gccaaagctctagcttgtctaaaccacactaaactgaaagggaaacctatgaggatgatg
tggtctcagagagatcctctttcaaggaaaactggtattggaaatctcttcatcaagaac
ctagatccatcggtcacaagtgcctgcttacagggcattttctgcaactttggcactata
ctttcttgcaaagtagctgaggaaaatgggaagagtaagggttttggctttgttcagttt
gattcggagcagtctgccacggctgctctcaatgctctccatgattcaatgcttgaaggg
aagaagttacatgtgtctaaatttgtcaagaagagtgagaggaaagcagccattgaagag
aaaacatttacaaatctgtatgtgaagcatctgtgtgaagattggactgaagatattctt
cgagacaagttttcagaatttgggaaggtttgcagtgttgccatcatgaaggatggcgct
gggaaatcgagaggttttgggttcatcaactttgagttgccagaagaagcaaagaaggct
gtggaggccttgaatggtgtacctttaggatcaaagaatttgtttgtaggaagagctcag
aagaaagctgagagggaagagctcttgaaacgtgagcgcgagctgatgctcaagtgtcac
actgagaaatcaaaagcttcaaatctttatgtgaagaatatcgacgtttctgtcgatgac
aacaaattacgggaacacttcagtggctgtggacaagtactttcggcaaaagtgatgtgc
agtgataatggaatgagtaaaggatttggttttgtgagcttctcctctccagaagaagca
aagagggctttggatacactccatggaactagtttccagggaagatctctgtatgtggct
atagcgcagcgtagggaagatcgtcgtaggatgctgcagagtcactatgctcaaaacaac
tctgtaccatctctctttccttccagccaggattacctttcccttcgatctcgttcacct
ggttgtattttacctccttgccctccaagccttctctcacacatgaattcataccagcca
atcatgtaccagcccttttgcaggaatatggggggactatacccttccgcaacacagagt
tgccagccacattatcctacatatattccaatgagacaaactcagcaagggaatcccagg
gaatgggtttatcatcctcattccatggcatacaccaactctagtgctcctatccaagat
ttcaaccgtgggaatcctggggggcagaagtttggctccaggaagcaagggaaaatcaga
ggtggccctgcagaagcctcatctaaaggacctgcagcaactgcaagaagtaccactgca
gcatcttcccctggtagctgcaagaacattggggaacttctccaccctctcgttgagaac
cttcagcccaactgtgcagctaagataacaggaatgctgttggaaatgaacaactccgat
gtaatcaagctgcttaagtcaccaaaaacgttggctgcacatgttgaaaaggctgttcag
gtgctgaaggagacaaattcatcaaccggtgccgatgctgctactggtctgccagtcaag
tctgcccgctgcttgaactactga
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