Malania oleifera: 131164402
Help
Entry
131164402 CDS
T09312
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mof
Malania oleifera
Pathway
mof03022
Basal transcription factors
mof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131164402
09124 Replication and repair
03420 Nucleotide excision repair
131164402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131164402
03400 DNA repair and recombination proteins [BR:
mof03400
]
131164402
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131164402
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131164402
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131164402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
HSP90
Motif
Other DBs
NCBI-GeneID:
131164402
NCBI-ProteinID:
XP_057977529
LinkDB
All DBs
Position
9:complement(73497794..73517671)
Genome browser
AA seq
772 aa
AA seq
DB search
MGFNGEKGRPTKRHKSSSKDDHRSTMIEDEDAYYAEEFDDDNRDGEKEGKKRDFTKLELK
LDHSNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS
VGLETETIISVLNKLSKTKLPKEMIDFVHGSTANYGKVKLVLKKNRYFVESPFPEVLKRL
LRDEVISRARITSEGSNGGDGFTISKAMGEIDGGHDGLLNEAELAAAAEEKETHSFEVDP
AQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGR
ARSGIIVLPCGAGKSLVGVSAACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRF
TSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF
RKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVW
CPMTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALT
EYAMKLRKPMIYGATSHVERTKILEAFKTSREVNTVFLSKVGDNSIDIPEANVIIQISSH
AGSRRQEAQRLGRILRAKGRIQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQ
GYSFKVITSLPPPDSGADLSYHRLDEQLALLTKVLSAGDDAVGLEQLEEDADDIALQKAR
RFVGSMSAMSGSNGMVYMEYNTGRNKHPGQSKVKAKPKDPSRRHYLFKQRFG
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgggatttaacggtgaaaagggtcgacccaccaaaaggcacaagtcttcgtcgaaggat
gatcataggagcacgatgattgaagatgaggacgcgtattatgctgaagaatttgacgac
gataatcgtgatggtgagaaagagggcaagaagagagattttacaaaattagagctaaag
ctggatcattccaatcggcccttatgggcctgcgctgatgggcggatcttcctagagact
ttctcgcctctgtacaagcaggcttatgattttctgattgccatagctgagcccgtgtgc
aggccagagtcgatgcatgagtacaacttgactcctcactcactgtatgctgcagtatca
gttggtctggaaactgaaaccattatttctgttttgaataaattgtcgaaaaccaagctt
cctaaagagatgattgatttcgtacatggttctactgccaattatggcaaggtgaagctt
gtgcttaagaagaatagatactttgttgaatcaccatttccagaggtattgaagaggttg
cttcgggatgaagttatatctcgagcaagaatcacttctgagggctcaaatggtggtgat
ggatttacaatcagcaaagccatgggtgaaattgatggtggtcatgatgggttactaaat
gaagcagagttggcagctgcagctgaagaaaaagaaactcattcttttgaagttgaccca
gctcaggttgaaaatgtaaagcaacggtgcttgccaaatgctttaaattatcccatgttg
gaggagtatgatttcagaaatgacacagtaaaccctgatcttgacatggaattgaaacct
caagcacaaccgcgaccatatcaggagaagagccttagtaaaatgtttgggaatggtaga
gcaagatctggaatcattgtactaccatgtggtgcagggaagtctctagttggtgtttct
gcagcatgccggatacgaaagagctgcctatgtttagcaacaaatgctgtgtctgttgat
cagtgggcctttcagttcaagttgtggtcaaccatacgagatgaacaaatttgccgtttc
acatctgatagcaaagaaaggttccgtggcaatgccggtgtggtcgtcacaacatataac
atggttgcttttggtggtaaacggtctgaagaatctgaaaagattattgaagagatcaga
aatagagaatgggggttgcttctgatggatgaggtgcatgtggttcctgctcacatgttt
cgaaaagttattagtatcactaaatctcactgcaaacttgggctcactgcaacacttgtc
agagaggatgaaaggataacagacttgaacttccttattggcccaaagctatatgaagca
aactggctggatttagtgaaagggggatttattgcgaatgtgcaatgtgcagaagtgtgg
tgtcccatgacaaaagagttttttgccgaatatctgaaaaaagaaaattccaagaaaaag
caggcgctttatgtgatgaatcctaacaagtttagggcttgtgagtttctcatacggttc
catgagcagcaacggggtgataagatcattgtttttgctgataacctttttgcactaaca
gagtatgcaatgaagcttcgaaaacctatgatctatggtgctaccagccatgttgaaagg
acgaaaattctcgaggcttttaagaccagtcgggaagtaaacactgtttttctttcaaag
gtgggtgataattccatagatatccctgaggcaaatgtgattattcagatttcatcacat
gctggttcaagacgtcaagaagctcaacgacttggtcgtattcttagagcaaagggtcgc
attcaggataggatggcaggaggtaaagaggagtacaatgcttttttctattctcttgta
tctacagatacacaggagatgtattactcaactaaaaggcagcaatttttgattgatcaa
ggctacagctttaaggtgataacgagtttgcctccaccagactcgggagcagatctgagc
taccaccggcttgatgagcaactggcacttctaaccaaggtattgagtgctggtgatgat
gcggttggtttagagcaattagaagaagatgcggatgacatagcccttcaaaaagcccgt
cgctttgtgggatcaatgagtgcaatgtctggttcaaatgggatggtttacatggaatac
aataccggacggaacaaacaccctgggcagagcaaggtgaaggccaaacccaaggatcca
tccaggaggcactatttattcaagcaacgatttggctga
DBGET
integrated database retrieval system
