Malania oleifera: 131164463
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Entry
131164463 CDS
T09312
Name
(RefSeq) sm-like protein LSM1B isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mof
Malania oleifera
Pathway
mof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131164463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131164463
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131164463
mRNA degradation factors
5'-3' decay
Lsm complex
131164463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
131164463
NCBI-ProteinID:
XP_057977648
LinkDB
All DBs
Position
9:87400935..87407944
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AA seq
158 aa
AA seq
DB search
MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLLGILRSFDQFANAVLGDACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDLDKEELPPRMSRVSVPEIRRVIAFFLFLFLYFFLPHN
FSDDNDTVIKIAQAVTQGPSLSAYLPLQCISFLKHIIY
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccggaagatatttatctatccacttctcttgccaattatctcgat
aaaaaacttcttgtattgctgcgagatggcagaaagctcttgggaatactccgttctttt
gatcaatttgccaatgctgtccttggggatgcatgtgagagagtaattgttggggatctt
tattgtgacatcccgttaggcctctatgtaatccgtggggaaaatgttgttctaattggc
gagctggacttggataaggaggaacttcccccacgtatgtctcgtgtctcagtgcctgag
attagaagggtaattgccttttttctttttctctttttatattttttcttgcctcacaac
tttagtgacgataatgacactgtgataaagatagcacaagctgtcactcaaggaccgagc
ttgtccgcttacttgccactccaatgtatctcatttttaaagcatataatctactga
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