Malania oleifera: 131167087
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Entry
131167087 CDS
T09312
Name
(RefSeq) regulator of nonsense transcripts UPF2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
mof
Malania oleifera
Pathway
mof03013
Nucleocytoplasmic transport
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131167087
03015 mRNA surveillance pathway
131167087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131167087
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
131167087
mRNA cycle factors
P-body specific factors
131167087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
131167087
NCBI-ProteinID:
XP_057981862
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All DBs
Position
10:12470375..12532582
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AA seq
1193 aa
AA seq
DB search
MDHHEDEGRVGGEHHGKQDDEEAVARLEEFKKSMEAKMALRHSNLNPERPDSGFLRTLDS
SIKRNTAVIKKLKQINEEQREGLMDELRSVNLSKFVSEAVTAICEARLRTSDIQAAVQIC
SLLHQRYKDFSPSLVQGLLKVFFPGKSGDDLDADRNMRAMKKRSSLKLLVELYFVGVIED
SGIFINIIKDLTGVENLKDRDATQTNLSLLASFARQGRIFLGLPLSGQEIYEEFFKGLSI
TADQKKIFRKSFHAYYDAAAELLQAEHSSLRQMEHENAKILNAKGELSDENVSSYEKLRK
SYDHLYRGVSSLAEALDMQPPVMPEDNHTTRVTTGEDASSPAAGKDSSTLEAIWDDEDTR
AFYECLPDLRAFVPAVLLGEAEPKGNEQSAKTQEQSTEPAPELDQVQVTAQDSTDVSADP
GTSQEGKGNEKGKDKEEKDKEKTKDSDKDKGKEKDADRRSENEKEKFKGLDGATLDGLLQ
RLPGCVSRDLIDQLTVEFCYLNSKSNRKRLARALFNVPRTSLELLPYYSRMVATLSTCMK
DVSSLLLQMLDEEFNFLINKKDQMNIETKIRNIRFIGELCKFRIAPAGLVFSSLKACLDD
FTHHNIDVACNLLETCGRFLYRSPETTVRMANMLEILMRLKNVKNLDPRHSTLVENAYYL
CKPPERSARIAKVRPPLHQYVRKLLFSDLDKTSIEHVLRQLRKLPWGECEAYLLKCFMKV
HKGKYGQIHLLASLTAGLSRYHDDFAVAVVDEVLEEIRLGLELNDYGTQQRRLAHTRLLG
ELYNYEQLDSSIIFETLYLILVFGHGTAEQDVLDPPEDCFRIRMVITLLETCGHYFDRGS
SKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFAELRPNMTRYSSIEEVNAALIELEEH
ERTVPTDKATSEKHSDTEKSSRNASRSISGNGQSLANGTEENGVHEEVRDSDSDSGSGSV
DPEGHDEEEELDELNHDDGCDSDDDDDDVVGAASDEEDEVHVRQKVQEVDPQEEADFDKE
LRALMQESLDSRKLELRSRPTLNMMIPMNIFEGSAKDHHGRGVEGESGDETLDEEAGGNK
EVQVKVLVKRGNKQQTKQMYIPRDCSLVQSTKEKEAAELEEKQDIKRLILEYNDREEEEL
NGVGAQASSWMPSGSSRVGGRAGTWEGSGGRAGGRHRHHHYHPVGGLYYGRRR
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggatcaccatgaggacgaaggccgtgttgggggtgaacaccatggcaagcaagatgat
gaggaagcagttgctcgccttgaggaatttaagaagtcaatggaagcaaaaatggctctt
cgccatagtaatttgaatcctgaaaggcctgactcaggttttcttaggacgctggattcg
agcattaagcgtaacacagcagttataaaaaaactcaagcagataaatgaagagcaaaga
gaaggcttaatggatgaattgcgaagcgtcaacttaagcaaatttgttagtgaagcagtg
accgctatttgtgaggccaggcttagaacttcagacatacaagcagcagttcagatctgc
tctttgcttcatcaaaggtacaaagacttctcgccaagcctagtgcaaggccttttgaaa
gtcttctttcctggaaagtctggggatgacttggatgccgacaggaacatgagggccatg
aaaaagcgcagcagtttaaaactcctggttgaactttactttgttggggtaatagaagac
agtggcattttcatcaatatcattaaggatcttactggtgtagaaaacttgaaggaccga
gatgccactcagacaaacttgtctctacttgccagttttgcgcggcaggggagaattttc
cttggtcttccattgtctggacaggaaatttatgaagagttttttaagggccttagtatc
acagcagatcagaagaaaatcttcaggaaatcatttcatgcttactatgatgctgctgca
gaactacttcaggctgagcattcttcacttcgccaaatggagcatgaaaatgcaaaaatt
ttaaatgccaaaggggagcttagtgatgaaaatgtctcgtcatacgaaaagctgcggaaa
tcttatgaccatttgtatcgtggtgtctcatctttagcagaagcacttgatatgcagcct
ccagttatgcctgaggataatcacacgactagggtaactaccggagaggatgcatcatca
cctgcagctggaaaagattcttctactcttgaagccatctgggatgatgaagatacaagg
gccttctatgaatgtttaccagatctcagagcatttgttcctgcagtattattgggagag
gcagagcccaagggcaacgaacaatctgcaaagacacaagagcaatcaactgagcctgcc
cctgaactggaccaagttcaggtgactgcccaagacagcacagatgtttctgcggatcct
ggtacttctcaagaggggaaaggcaatgagaaaggaaaggacaaagaagaaaaggataaa
gagaagacaaaagattcagataaggataaagggaaagaaaaagatgctgacagaagaagt
gaaaatgaaaaagagaaatttaaaggtcttgatggggcaactttggatggcctactgcag
agacttcctggttgtgtgagccgcgaccttattgaccaattaactgtagaattttgttac
ttaaattcgaagtcaaaccggaagaggcttgctagggcattgtttaatgtcccaaggaca
tctctagaactgttgccatactactctcgtatggtcgccacgctgtcaacttgtatgaag
gatgtttcttctttgctgttgcaaatgttggatgaggagttcaatttcttgataaataag
aaggatcaaatgaacattgaaacaaagatcaggaacattaggtttattggagaactctgc
aagtttagaattgcacccgctggccttgttttcagtagtttgaaggcttgtttggatgat
tttactcatcataacatcgatgttgcttgcaatcttcttgagacttgtgggcgttttcta
tatcgatcacctgagactactgtgcgcatggctaatatgttggagatattgatgcgctta
aaaaatgtaaaaaatttggatcctcgtcacagtacccttgtagaaaatgcttattaccta
tgcaagccacctgaaagatctgcacgcatcgctaaagttcgtcctccattgcatcagtat
gtcagaaaattgcttttctcggatcttgacaagacttctattgagcatgtgctgagacaa
cttcgtaaattaccatggggcgaatgtgaggcctatcttttgaaatgctttatgaaggtt
cacaaggggaagtacggccagattcacttgcttgcatcactcactgctggattgagccgc
tatcatgatgattttgcagttgcagttgttgatgaggttttggaggagattaggctgggg
ctagaattgaatgactatgggacgcagcagcgacgccttgcacacacgagactgttgggg
gagctatacaactatgaacaactggattcttctattatttttgaaacactttatttgatt
cttgtttttggtcatgggacagcagagcaagatgttctagatcctccagaagattgtttc
cgcatcaggatggttattacacttcttgagacctgtgggcactactttgatagaggttct
tccaagaggaaactcgatcgattcttaatacatttccagcggtatattctcagcaaaggt
gcattaccacttgatattgaatttgatttgcaggacttatttgcggaattgcgccccaac
atgacccgctattcctccattgaagaggttaatgcagctcttatagaacttgaggagcat
gaacgtactgtcccaactgataaggccaccagtgagaagcattctgacactgaaaaatca
tctaggaatgcctctcgttccatatcaggaaatgggcaaagccttgcaaatggtactgag
gaaaatggagtgcatgaagaagtcagagacagtgatagtgactcaggtagtggcagcgtt
gatccggagggacatgacgaagaagaggagttggatgaattgaatcatgatgatggatgt
gacagtgatgatgatgatgatgatgtggttggagctgcttctgatgaggaggacgaagtc
catgtcagacagaaggtgcaggaggtggacccccaagaagaagctgactttgacaaggag
ctcagggctctaatgcaggagagtttggactcacgcaagctggagctgcggtctcgccca
acactgaacatgatgataccaatgaacatatttgagggatctgccaaagatcaccacgga
aggggtgttgagggggaaagtggagatgagacactggatgaagaggctggaggaaacaag
gaggttcaggtgaaggttcttgtgaaacgtggtaacaagcaacaaacgaaacagatgtac
attcctcgggattgctcgcttgtgcagagcacgaaagagaaggaagcagctgagcttgaa
gagaaacaagacattaagaggctgatattggagtacaatgatagagaagaggaagagctt
aatggggttggggctcaagcatcaagctggatgcctagtgggagcagtagagttggtggc
cgcgctggcacatgggaaggaagtggtgggagagctggcggacgtcatcgacatcatcac
tatcatccagttggtgggctctattatggcagaagaagatga
DBGET
integrated database retrieval system
