Malania oleifera: 131167644
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Entry
131167644 CDS
T09312
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
mof
Malania oleifera
Pathway
mof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131167644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131167644
Enzymes [BR:
mof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131167644
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
131167644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131167644
NCBI-ProteinID:
XP_057982425
LinkDB
All DBs
Position
11:38377829..38440879
Genome browser
AA seq
1669 aa
AA seq
DB search
MANTTEGATECVEAIRFSFYTDEEVKRMSFKKISDPNLLDDVQRPVLGGLYDPALGPLDE
LSSCKSCGQRSFHCPGHCGHIELVSTVYNPLLFDTLYSLLQKTCYFCGHFRSDAKQVEKC
ASRLELIIKGDIVGAKKLDSVSQDESPCPEDSDGSHASCSTVHSGAQYHSPEHFKPQEWT
SLQFSEAMSVLNNFLKPKHKECKNCKARNPSISKPTFGWFHMNGMLGANTRGNIVRECKL
EGPFTDGVEEKLSSDTDNVDDTFPKGEAIDTIETHSSTAAKRRERQAPVEFFKQQNFFSG
SLLPSHVRVLMKKLWENEAMLCSFISDLQQARYGTYARKEGYSMFFLDTLLVPPIKFRPP
SKGGDSVMEHPQTVLLGKVLQSNLSLANAHIKNLGHPAVIKQWRDLQQSINVLFDSKTAG
QRDMASGICQLLEKKEGIFRQKMMGKRVNYACRSVISPDPYLAVNEIGIPPYFALRLTYP
ERVTPWNVSKLRDAIVNGPEIHPGATHYVDKMSKAKLSSNRKMRISISRKLPSSRGVVTQ
PGKNCNFEFEGKVVYRHLQDGDVVLVNRQPTLHKPSIMAHVVRVLKGEKTLRMHYANCST
YNADFDGDEMNVHFPQDEISRAEAYNIVNANNQYIIPTRGDASRALIQDHIVSAVLLTKK
DTFLTREECCQLLYSSGVSTAGSGALSAKPGQKVSVVDYDVEMQLSLPAIWKPEPRWTGK
QVITAVLNHVTRGHAPFTVKKDGKIPREYFGSETDEEKLHKEKKPGEYTLFIYKNNLVHG
VIDKAQFGNYGLVHTVQELYGSNTAGILLSVLSRLFTVFLQLHGFTCGVDDLLILRDYET
KREAELEDAENIGEEVHRQFIGLKDDKIDSMTLQMEIEKAIRSNGESAIKCLDRMMSSML
NEKTSNINKELLNKGLLRPFPRNCISLMTTTGAKGSTVNFSQISSFLGQQELEGKRVPRM
ISGKTLPCFLPWDCASRAGGFIRDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQ
RCLVKNLECLKVCYDHTVRDADGSIVQFSYGEDGVDVHQTSFLAEFNAMAANQAIVREKF
GLKHDGACKSEIDSNIDKLPFINSLSEKERKDFIDNLSKGKEKKLLNLVKHKYFASLAQP
GEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTASSDIKTPIMTCP
LLKDRTEDDGKRLAAKLKKVTVADIVESMEVCIMPVALHNRQISSIYKLKMKLYDPEFYP
PYSDISLEDCENKLEVVFMRELEDAIQNHLSLLSRISGIKNFTSDSLSNSSNETDEEVSG
NRAKGKGENDHDDDDDENDDEEADDIGLDAQKRKQQAADDIDYEDGSDEEPNEEGSSIGF
EKEIDQTEVEVEIGEENEAGVSGVDAEASEMPSGHKTSSKTKSGEKKTESQAKEKKRSRR
RLIKDSDRAIYVAAKGVHFEAHFRFTNEPHILLAQIAQKAAKKVYIKNCGNIDRCDLIEC
RKDQVLTYKEDDNKGSKQQENKWGLKTAGVDFISFWQMQDELDVRCIYSNNIHDMLNTYG
VEAARNTIIKEVQNVFNSYGVSVNVRHLTLIADHMTQSGGFRPMSRGGAIAESVSPFSKI
SFETAAKFIVQAACYGLTDKLESPSARICLGLPVKMGTGCFDLMQKIDV
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacacaacggagggcgcaacggagtgtgtggaggccattcgctttagtttttat
acagatgaagaggtgaagaggatgagttttaagaagatttcagaccccaatttgctagat
gatgtgcagagaccagtgctgggtggactttatgatcccgcattgggtccattagacgag
ctttcatcgtgtaaatcatgtggtcagcgctcattccattgccctggtcattgtgggcat
attgagcttgtgtcaacagtctacaatccattgctctttgatacactttacagtcttcta
cagaagacatgttacttttgtggtcattttaggtcagatgcaaagcaggttgagaaatgc
gcttctcgattggaactcataataaagggtgatattgttggggcaaaaaagttggattca
gtatcacaagatgaatccccatgtccagaggacagtgatgggagtcatgcatcatgttct
acagttcattcgggtgcccaataccatagtcctgagcattttaagccgcaagaatggacg
tctcttcaattttctgaagcaatgtctgttctgaataattttctaaagccaaaacataaa
gagtgtaagaattgcaaagccagaaatccttcgatcagtaaacctacttttggatggttt
cacatgaatggtatgttgggtgccaacactagaggaaatattgtcagggagtgcaagctg
gaaggtccatttaccgatggtgttgaagagaaactttcatctgacacagacaatgtcgat
gatacatttccaaaaggggaggctattgacacaattgaaacacattcatctaccgcagcc
aagaggcgtgaaaggcaagcacctgttgaattctttaagcagcagaatttcttctcaggg
tcactcttaccatcacatgttagagttcttatgaagaagttgtgggagaacgaggctatg
ctctgttcctttataagtgatcttcagcaagcacggtatggtacatacgcaaggaaagag
ggttattccatgttctttttggacacacttcttgtgcctccgatcaaattcaggccccca
tccaagggaggtgattctgtgatggagcatcctcaaactgttctactggggaaggtgctg
caatccaacttatctttggcaaatgctcatattaagaacctaggacacccagcagttatt
aaacagtggagggatcttcagcaatccataaatgtgctttttgatagcaagactgcaggt
caaagagatatggcttctgggatatgccaactgctggagaagaaggagggaatcttccgg
cagaaaatgatggggaaaagggttaattatgcatgccgctctgtcatatctccagatcca
tatttagcagtcaatgaaattgggatacctccatattttgcattaagattaacctatccc
gagagagtcactccttggaatgtttccaaattgagggatgctatcgtaaatggtcctgaa
attcatcccggagctactcactacgttgataaaatgtctaaagcaaaattgtcatcaaac
agaaaaatgcgtatttcaatctcaagaaaattaccttcctctcgaggggttgtcacacaa
cctggtaagaactgcaattttgaatttgaaggaaaagttgtatatcgtcacttgcaagat
ggagatgttgtactcgtcaatcggcagcctacacttcacaagccaagtataatggctcat
gtagttcgtgtattgaagggggagaaaacgctacgtatgcattatgcaaattgcagtacc
tacaatgctgattttgatggtgatgaaatgaatgttcatttcccacaagatgaaatttcg
cgtgctgaagcttataacattgttaatgcaaataatcagtacattatcccaactcgtggt
gacgctagtagagccttgattcaggatcatattgtgagtgctgtgctgcttacgaagaaa
gatacgtttttaactcgtgaggagtgctgtcagcttctatatagctctggtgtttccact
gctgggtccggcgctctctccgccaaacctggtcagaaagtttctgtagtagactatgat
gttgagatgcagctctctttgccagcaatatggaaacctgagccccgttggacagggaaa
caggtcataacagctgtgctaaatcatgtaacaagaggtcatgcaccatttactgttaaa
aaggatgggaagatcccccgtgaatattttggaagtgaaactgatgaagagaaactgcac
aaggagaaaaaacccggtgaatacacattgtttatttataaaaacaatttggtgcatggt
gtgattgacaaggcgcaatttgggaactacggtttggttcatacggtgcaggagctctat
ggttcgaacactgcaggcatcttgctttctgtattgagtcgcttattcactgttttcttg
cagttgcatgggttcacatgtggagtagacgatcttcttatattacgagattatgagacc
aaaagggaggcagaacttgaagatgctgaaaatattggggaagaagttcatcgccaattc
attgggttgaaagatgataaaattgattccatgacattgcaaatggagattgaaaaagcc
atacgcagtaatggagaatctgccataaaatgcttggataggatgatgtcgagtatgctg
aatgagaaaacctctaatattaacaaagagttgttgaataaagggctattaaggcctttt
ccaaggaattgcatttctcttatgactacaactggtgccaaaggtagtacggtaaatttc
tcacaaatatcttcttttttgggccaacaagagttagaaggaaaacgagtaccacgaatg
atttctggaaaaacattaccctgctttcttccctgggattgtgcatctcgagctggaggt
tttataagggatcgctttctaacaggtcttcggcctcaagaatattacttccactgcatg
gctggtcgtgaagggctagtagatacagctgtcaaaacatctcgaagtggttacctccaa
aggtgccttgtaaaaaatcttgaatgcctgaaagtttgttatgatcatactgtgcgtgat
gcagatggatcaattgtacaatttagttatggagaagatggtgtggatgtccatcagaca
agctttcttgcagaatttaatgcaatggctgcaaatcaggcaattgtccgtgaaaaattt
ggtctaaagcatgatggagcatgcaaatctgaaattgatagtaatattgataagctgcct
ttcatcaatagtttatctgagaaggaacggaaggatttcattgataacttatcaaagggg
aaagaaaagaaacttcttaatttagtgaagcacaagtactttgcaagtcttgcacagcca
ggtgaaccagttggtgtgattgctgctcagtctgtgggggaaccatcaacacagatgaca
ttgaacactttccaccttgctggccgtggagaagtgaatgtgacccttgggatcccacgt
ctgcaggagatcttgatgactgcttcaagtgatatcaaaactccgataatgacatgccct
ttgctgaaggacaggacagaagatgatggcaagcgtcttgctgcaaagttgaagaaggtc
actgtagcagacattgtagagagtatggaagtatgtattatgccggttgccttacataat
cgccaaatatccagtatatataaactcaagatgaagctttatgaccctgaattctatcct
ccatactccgatatatcattagaagactgtgagaataaattagaagtagtttttatgaga
gaattagaagatgcaattcaaaatcatctttctttgctctccagaatcagtggcataaaa
aatttcacctcagattcactgtcaaattcgtcaaatgagacggatgaagaggtttctggg
aacagagcaaaaggaaagggcgaaaatgatcatgatgatgatgatgatgaaaatgatgat
gaagaggctgatgatattggtctagacgctcaaaaaagaaaacagcaagctgcagatgat
atagattatgaagatggctctgatgaagaacccaatgaagaggggtcatctattggattt
gaaaaagaaatcgatcagactgaagttgaagttgagattggggaggaaaatgaagctggt
gtgtctggtgttgatgctgaagcctcagaaatgccatcgggtcataaaacctcctccaag
actaaatctggtgagaaaaagacagagtctcaggccaaagaaaagaagaggtccagaaga
agactaatcaaggactctgatagagcaatctacgtcgctgcgaagggtgtgcactttgaa
gcccactttagatttaccaatgaacctcatatcttactggcacagattgctcaaaaagca
gccaaaaaggtctacatcaagaactgtgggaacattgataggtgtgacttaattgagtgt
cgcaaagatcaagtacttacctacaaggaagatgataataaaggttctaaacaacaagaa
aataagtgggggctgaagactgctggagtggatttcatttcattttggcaaatgcaggat
gagctcgatgttaggtgtatctactctaacaatatccatgatatgctaaatacgtatgga
gttgaagccgccagaaataccatcataaaggaggtgcaaaatgttttcaactcatatggt
gtttctgtcaacgtccggcacttgacccttattgccgaccacatgactcagtcgggtggg
tttcgaccaatgagcagaggtggggctatagcagaatcagtttctcccttcagtaaaatt
tcttttgaaactgctgctaaattcattgtccaagctgcatgttatgggctgaccgacaag
ctggagtccccatctgctagaatctgccttggcttgcctgtgaaaatgggtactggctgt
tttgacctgatgcagaaaattgatgtttga
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integrated database retrieval system
