Malania oleifera: 131167800
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Entry
131167800 CDS
T09312
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131167800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131167800
Spliceosome [BR:
mof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131167800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_Vps41
eIF2A
Beta-prop_Nup120_160
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
131167800
NCBI-ProteinID:
XP_057982676
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Position
11:complement(33812925..33849141)
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AA seq
573 aa
AA seq
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MAAEQESSISPSVEEASAAVTDDQAPSSTISPTALQQIQPIIPPGVPPPQTVPPIAPIPS
IPRPLAPLPVLRPTLPQNGMVGGGDSDSDDDGAGHTRANQGGSAEYEISEESRQVRERQE
KAMQDLLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRMIMARLDAEG
QLEKLMKAHEEEEEAAASAAKEDAAEEEMFQYPFYTEGPKELLGARVEITKFSILRAALR
LQRARRKRDDPDEDLNAEMDWALKQAGSLVLDCSEIGDDRPLSGCSFSNDGNLLATCALS
GVAKLWSMPEVKKLSTLKGHSERATDVAFSPVHNHLATASADRTARLWNTEGSPLKTFEG
HLDRLARIAFHPTGKYLGTTSFDKTWRLWDVETGMELLLQEGHSRSVYGLCFHLDGSLAA
SCGLDAIARVWDLRSGRSILALEGHVKPLLGISFSPNGYHLATGGEDNTCRIWDLRKKKS
LYVIPAHSNLISQVKFEPQEGYFLATASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDVI
GDGQCIATVSHDRTIKLWSTSDGGREKAAMDID
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagcaggaaagctccatctcaccctcagttgaagaggcttctgcagcagtt
actgatgatcaggctcccagttccaccatttcccctactgcacttcaacaaatccagcca
atcatcccgccaggggttccacctccacaaactgtgcctcctattgctccaataccctcg
atcccccggccattggcacctcttcctgtcctgaggccaactcttccacaaaatggcatg
gttgggggaggtgattcagattctgacgatgatggtgctggccatacccgagcgaatcag
ggtggttcggctgaatatgagatttcagaggagagcagacaggttagagagcggcaggaa
aaggcaatgcaagatcttctgatgaagcggcgtgcttctgccttagctgtgcccaccaat
gacatggctgttcgggctcgccttcgcaggcttggtgagccaataaccctgtttggagaa
cgagagatggaaagacgggatcggttgcggatgattatggcaaggctggatgctgaaggg
cagttggagaagctgatgaaagctcatgaggaggaggaggaggctgctgcttctgctgca
aaagaggatgctgctgaggaagaaatgtttcagtaccccttctatactgaagggccaaaa
gagcttttaggggctcgagttgagattacaaagttttctatattgagggcagctctgcga
ctgcaacgtgcaaggagaaaaagggatgatcctgatgaagatttgaatgcagagatggat
tgggctttgaaacaagcaggcagtttggtccttgattgcagtgaaattggggatgatcga
ccactttcaggatgttccttctcaaatgacgggaatctgcttgccacctgtgctctaagt
ggagttgctaagttatggagtatgcctgaagttaagaagctttctaccttaaaggggcat
tcagaacgtgcgactgatgttgcattctctcccgtgcacaatcatttagcaactgcctca
gctgatcgaactgcaaggttatggaatactgaagggtctcccttgaagacatttgagggc
catctagatcgtcttgctcgtattgccttccatccaacaggaaagtacttgggtacgact
agctttgacaagacttggagattgtgggatgtggaaactggaatggagttgcttcttcaa
gaaggccacagcagaagtgtgtatgggctttgttttcaccttgatggatctttagcagca
tcgtgtgggttggatgcaattgctcgcgtatgggaccttcgttctgggaggagtattctt
gctttggaaggtcatgttaagccgcttcttgggatcagcttttcaccaaatggctatcat
ttagctactggtggtgaagataatacttgtcgaatttgggacttaagaaagaaaaaatcc
ttgtacgtaataccagctcactctaacctcatttcacaagtcaaatttgagcctcaagag
ggatattttttggcaactgcttcttatgatatgactgcaaaggtatggtcggctagggat
tttaagcccgtcaagaccttatctggacatgaagccaaagttacatccttggatgtgata
ggagacgggcagtgcattgctactgtctcacatgaccgcacaatcaagctatggtcaacc
agcgatggtggtagagaaaaagcagctatggatatagattga
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integrated database retrieval system
