Malania oleifera: 131167820
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Entry
131167820 CDS
T09312
Name
(RefSeq) protein CLP1 homolog isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131167820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131167820
Enzymes [BR:
mof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
131167820
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
131167820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
AAA_22
AAA_24
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
131167820
NCBI-ProteinID:
XP_057982734
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Position
11:48923426..48937150
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AA seq
441 aa
AA seq
DB search
MAFGGSSVGAMTAAGSSMAATMRQVKLDRECELRIEVSPDSPLRLRLLTGNAEIFGTEIA
PEIWLNFPPRLKFAVFTWYGATIEMDGPTETDYTADETPMISYVNVHAVLEGRRNRAKAS
SSESDYFQGPRVIVVGPTDSGKSTLSRMLLSWSAKQGWKPTFVDLDVGQGTITIPGCIAA
TPIEMPIDPVEGIPLEMPLVYFFGYATPSENVELYKVLVKELAKTLERQFAGNAESRAAG
MVINTMGWIEGVGYELLLHAIETFSANVVLVLGQEKLCSMLKDVLKNKPNVDVVKLQKSG
GVVSRNGKVRIKARSYRIREYFYGLANDLSPHSNIANFSDLTVYRIGGGPQAPRSALPIG
AEPAADPTRLVPVNINRDLLHSVLAVSFAKEPDQIISSNVAGFIYITDIDIQRKKITFLA
PSSGELPSRYLIVGKMTWLET
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggaggatcgtctgtcggagctatgacggctgctggatcgtcaatggcggca
acaatgaggcaggtaaagctggacagagagtgcgagctcagaatcgaagttagtcccgac
tcgcctctccggctccgactgctcactggcaatgcagagatctttggcactgaaattgcg
cctgaaatctggctcaattttcctccccggctcaagttcgctgtttttacttggtatgga
gccacaattgaaatggacggtcctactgaaactgattatacagcagatgagacacccatg
atcagttatgtaaatgtgcatgctgtgctggaaggacgaagaaatcgtgccaaggcatcc
tccagtgaatctgattatttccagggtcctagagtaattgttgtgggacctacagattcc
ggaaagagtacactttcaagaatgcttctcagttggtcagctaaacagggttggaaacct
accttcgtggatttggatgttggtcaaggaaccataaccattcctggttgcattgctgct
accccaattgaaatgccaattgatcccgtggaaggaatacctctagaaatgccactagtt
tacttttttgggtacgcaacccctagtgaaaatgtagaattgtacaaagtgcttgtgaag
gagcttgctaaaacactagagagacaatttgctggcaatgctgaatctcgagctgctggg
atggtgatcaataccatgggatggatagaaggtgttggttatgagttgctcctccatgca
attgagacattcagtgccaatgttgttttggttttgggtcaggaaaaactttgcagcatg
cttaaggatgtcttgaaaaacaagcctaatgtggacgttgtgaagcttcaaaaatcaggt
ggtgttgtatctaggaatgggaaggtgcgcataaaagccaggagttataggataagggaa
tatttttatggccttgcaaatgacctctccccacattcaaacattgcaaatttcagtgat
ttaactgtctatcgtattggtggaggacctcaggccccacgttctgccctacctattggt
gcagagcctgctgctgaccctacaagattggttcctgtgaatatcaaccgagacttgctc
cattcagttcttgcagtttcttttgccaaagaacctgatcaaattatctcgagtaatgtt
gctggatttatctatataacagatattgatattcagaggaagaaaattacattcctggcg
ccatcctctggggaacttccaagcagatacttgattgtgggaaaaatgacatggcttgaa
acatga
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