Malania oleifera: 131167852
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Entry
131167852 CDS
T09312
Name
(RefSeq) uncharacterized protein LOC131167852 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131167852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131167852
03041 Spliceosome [BR:
mof03041
]
131167852
03036 Chromosome and associated proteins [BR:
mof03036
]
131167852
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131167852
Spliceosome [BR:
mof03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
131167852
Complex B
131167852
Complex C
U2 SnRNP specific factors
131167852
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
131167852
TFTC complex
131167852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
131167852
NCBI-ProteinID:
XP_057982840
LinkDB
All DBs
Position
11:complement(42351537..42393332)
Genome browser
AA seq
1393 aa
AA seq
DB search
MAVSKEASSSAHHRRSSPNAAYYLAKCVLRGSVVLQVVQGRLRSPTSLDIVFGKETSIEL
VIIGDDGIVQSVCEQAVFGTIKDLAVLHWNDKFSTQNPQMAGKDILVVISDSGKLSFLRF
CNEMHRFFPVTHVQLSSPGNSRHQLGRMLAVDSNAGLIAASAYESRLAIFSVSMSAGSNI
IDKRIFYPPENELDTTSTRGVQRTSICGTIWGMCFVSKDLSQPSKKHNPVLAVLLTRRGA
TTNELLLLEWNIREHTVYVVSVFAEAGPLAYSIVGVPYSYGLVFLFRVGDVLLMDLRDAS
NPCCVYRTSLPAAVEEQNFIEESCRMHDGDDEGIFKVAASALLELGDMRVDNIKCDDPMS
IDNDSVSVKSPSKYVCSWCWGPGNGENQRMVFCLDTGDFFMIEISFDSDGLKVNMSDPLY
KSLPCKALLWVENGFLAALVEMGDGMVLQLENGKLVCRSPIQNIAPVLDMSVVDCHEEKH
DQMFACCGMAPEGSLRIIRSGISVERLLSTAPIYQGITGTWTVRMKVVDSYHAFLVLSFI
EETRVLSVGLSFTDVTDSVGFQPDVCTLACGLVGDGMLVQIHRSAVRLCLPTMVAHPEGI
SLSSPVHTSWFPDNLSISLGAVGNNLIIVATSNPWYLFILGVRSLSPFQCEIYEKQHVRL
QNELSCISIPQKHFEQKQSTSRLNLVENNRSTALPIGVGIGSTFVIGTHKPSVEILCFLP
DRGLRVLAIGAISLTNTMGTVISGCIPQDVRLVLVDRLYVLSGLRNGMLLRFEWPAASKM
SSLESFSHRPSYDYSCLVNVDSAKKPNMTGLNSIGSHTPTVNSSEAKDNIPIFLQVVAIR
RIGISPVFLVPLSYSLDADIIALSDRPWLLQTARHSLAYTSISFQPATHATPVCSDECPM
GIIFVAENSLHLVEMVHYKRLNVQKFCISGTPRKVLYHNESRLLLVMRTDLSNDSYSSDI
CCIDPLSGSEISTFKFGHGETGKSMELVRVGNEQVLVVGTSLTSGPAIMPSGEAESTKGR
LIVLCLDHVQNSDSGSMTFCSKAGSSSQRTSPFREIVGYAAEQLSSSSLCSSPDDTSCDG
INLDESWELRLAYATAWPGMVLAVCPYLDRYFLASAGNAFYVCGFPNDSPQKVRRYAVGR
TRFMIMSLTAQFTRIAVGDCRDGILFYSYREDTKRLEQLYGDPGQRLVADCILMDVDTAV
VSDRKGSIAILSCSNHLEDNASPESNLTLSCAYYMGEIAMRIRKGPFSFKLPADDLLKGY
EGPNIVSESLHNSIIATTLLGSIIIFIPLSREEYELLEAVQARLLVHPLTSPILGNDHNE
FRSRENQAPEHKILDGDMLVQFLELTNVQQEAILGLPLGSADPLTSTSKLPFPSPIPVSQ
VVQLLERVHYALN
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccaaggaagcgtcctcctccgcccaccaccgtcgatcctctcccaacgcc
gcctactatcttgccaagtgcgttctccgcggaagcgtcgttctgcaagtcgtccaaggc
cgcctccgatctcccacctccctcgacatcgtcttcggcaaggagacatccatagagttg
gtaataattggtgatgatgggattgtacagtctgtctgtgagcaggctgtgtttggcaca
ataaaagatcttgctgttttacactggaatgataagttttctacacaaaacccacagatg
gcggggaaagacattttggttgttatctccgactctggaaagctctcatttttgagattt
tgcaatgaaatgcacaggtttttcccggtgacacatgttcaactctccagtcctggaaac
tcaaggcatcaacttggaaggatgcttgcagttgattcaaatgctggtttaattgccgct
agtgcatatgaatcccgattggctatattctctgtgtcaatgtctgctggcagcaatatt
attgacaagagaatattctatcctcctgaaaatgagctggatacaactagtaccagaggt
gtccagagaaccagtatatgcggcactatttggggcatgtgttttgtttcaaaggatctt
agccaaccaagtaagaagcacaatcctgtactagccgttcttttgactaggaggggagca
acaacaaatgagctgctgttgttggaatggaatattagagaacacactgtttatgttgtc
tctgtatttgctgaggctgggcctctcgcatatagcattgttggagttccttattcttat
ggattggtgtttttgttcagggttggtgatgttctcttaatggatcttcgggatgcttcc
aacccatgttgtgtttataggacaagcttacctgctgcagttgaagagcagaattttatt
gaggagtcctgtagaatgcatgatggtgatgatgaaggtatatttaaagttgctgccagt
gctttattggagctgggggatatgagagtggacaacataaaatgtgatgatcctatgagt
atcgacaatgatagtgtcagtgtaaagtcaccctccaaatatgtatgctcatggtgttgg
gggccaggaaatggagaaaatcaaaggatggttttctgtttagatactggtgattttttt
atgattgaaatttcttttgattctgatggccttaaagttaatatgtctgatcctctctac
aaaagtctaccctgcaaagcacttttgtgggttgaaaatggatttctggctgcactggtg
gagatgggggatgggatggtcctccaattggaaaatggaaagcttgtttgcaggagtcct
attcaaaatattgcgccagtcttggacatgtcagttgtggattgtcatgaggagaaacat
gatcaaatgtttgcctgttgtggtatggcaccagagggatcattaagaattattcgaagt
ggtatcagtgtggaaaggttattgagcactgcccctatttatcagggcataactggtact
tggacggttcgaatgaaagtcgttgattcttatcatgcttttcttgtattatcattcatt
gaagagacgagagtattgtcagttggtttaagctttactgatgtgactgattcggttggt
ttccagcctgatgtctgtactttggcttgtggccttgtgggtgatggtatgcttgtccag
atacaccggagtgcagttagattatgtttacctactatggttgctcatcctgaaggtata
tctttgtcttcaccagtacatacatcttggtttccagataatttgagcatcagcttgggt
gctgttggaaataatttgataattgttgctacttccaatccatggtacttgtttattctt
ggagtaagatcattatcgccattccaatgtgaaatatatgagaagcaacatgttagactg
caaaatgaattatcctgcatttccataccacaaaaacattttgagcagaaacagtctacg
tctcgtcttaatttagtggaaaataatcgttcaactgcacttccgattggggttggcatt
ggcagtacctttgtgattggaacacataagccttcagtggaaattctatgctttctacct
gatagaggcctgagagttcttgctattggggcaatttcattaacaaatacaatggggaca
gttattagtggttgcattcctcaagatgtcagacttgtactagttgatcgattgtatgtt
ctttcaggattaaggaatggaatgctgctgcggtttgagtggcctgctgcctctaaaatg
tcttcattagaatctttcagtcacaggccttcctatgattattcctgcctggtaaatgtg
gacagtgctaagaagcctaatatgacaggtctgaattctattggctcacacacgcccact
gttaattcatctgaggcaaaggacaacattcccatttttctccaagtagttgccatccgc
cgaattggcatttcgcctgttttcctggttcctctgagctattcacttgatgcagatata
attgctctcagtgataggccttggttattgcaaactgcaaggcacagtcttgcatatact
tctatctcatttcaacctgctactcatgcaactcctgtatgctctgatgaatgccccatg
ggaattatattcgttgcagaaaacagtctacatttggtagagatggttcactataagagg
cttaatgtgcagaagttttgcattagtggcactccgaggaaggttctatatcataatgaa
agcaggttattgcttgtcatgagaactgatttgagtaatgattcatattcatctgatatt
tgttgcatagatcctctcagtggctcagagatttcaacttttaaatttggacatggggaa
acaggaaaatccatggagttagtgagggttggaaatgaacaggttcttgtggttggaacc
agtctaacttctggtccagctataatgcctagtggtgaagctgaaagtaccaaggggcgc
ctaattgttctctgccttgatcatgtacaaaattcagacagcggttctatgacattttgt
tcgaaggcaggctcgtcttctcaacgaacttcaccatttcgtgaaattgttgggtatgct
gctgaacagctgtcaagcagtagtctctgcagcagcccagatgatactagctgtgatgga
attaatcttgatgagtcatgggaattacgattggcttatgcaactgcatggcctggaatg
gtacttgctgtctgtccttatcttgaccgttatttcctggcatctgctggtaatgctttc
tatgtatgtggttttccgaatgatagtccccaaaaagtgagaaggtatgctgtaggaaga
acgcgcttcatgataatgtctttgactgcacaatttactagaattgctgttggtgattgc
cgtgatggcatccttttctactcctatcgtgaggataccaaaaggctggaacaactttat
ggtgaccctggacagaggttagttgctgattgtattctcatggatgttgatactgctgtt
gtttcagatcgtaaggggagcattgctattctctcatgttccaaccatttggaagataat
gcaagtccggaatcaaacttgacactgagctgtgcgtactatatgggtgagatagccatg
agaattaggaaggggcccttttcgtttaaacttccagctgacgacctactgaagggttat
gagggtcctaacatagtgagtgagtccttgcacaatagtatcatagccactacgttgctg
ggaagcataataatcttcattccattatcgagggaagagtacgagttgttagaagctgta
caggctagacttcttgtccacccactgacttctcctattttagggaacgatcataatgaa
tttcgaagcagggaaaaccaggctccagaacataagatacttgacggtgacatgctggta
cagtttttggagctgacaaatgtgcaacaggaggctatattaggactacctcttggttcg
gcagatccattaacctcaacctcaaaactaccatttccatcccctatcccagttagtcaa
gtcgtgcaactcttggaacgagttcattatgccttgaattga
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integrated database retrieval system
