Malania oleifera: 131167982
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Entry
131167982 CDS
T09312
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131167982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131167982
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
131167982
mRNA cycle factors
Common to processing body (P body) and stress granule
131167982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
MOV-10_Ig-like
Motif
Other DBs
NCBI-GeneID:
131167982
NCBI-ProteinID:
XP_057983080
LinkDB
All DBs
Position
11:complement(30455909..30469458)
Genome browser
AA seq
967 aa
AA seq
DB search
MTILMDNSLDLSSRERAQRLYNKNVELESRRRRSVHARIPSDPNAWQQMRENYEAIILED
HAFSEQHEIEYALWQLHYKRIEELRAHFTTALASTGPNASQSGKSSSSTRLDRITKIRSQ
FKAFLSEATGFYHDLMLKIRAKYGLPLGYFSDDSENQMVMAKDGNKSAETKKGLISCHRC
LIYLGDLARYKGLYGEGDSKVRDFAAASSYYMQASSLWPSSGNPHHQLAILASYSGDELL
AIYRYFRSLAVESPFSTARDNLIIAFEKNRQSYSQLHSEVKSSPVKSAPIRMTGKARGKV
GAKLPFKENKTEASSIEERSSSTSETFKAFSIRFVRLNGILFTRTSLETFGEVFSMVRDD
LLELLSSGPEEEYNFSSSATESGLLIVRLIAILIFTIHNVNRETENQSYAEILQRSVLLQ
NAFTAIFEFMGHIIERCIQLHDPSVSYLLPGVLVFVEWLACHPDIAAGKEVEEKQASARS
FFWNHCVNYLNKLLLSGLMFTNEDEDESCFFNTSTYEVETANRLALMEDFELRGFLPLLP
AQLILDFSRKHSLGSDGTIKEQKARIQRIIAAGKALVNVVQVGQQGIYFDRKMMKFSIGA
DPEISNDVVLTSPLEVPAINGMGQKHPTEKKVNLGVLLPKGQQLHVEGEDEDEVIVFKPS
MTEKQADMNASGGEFGSYVGSLSELHDGKQVRNAFDLNSRPPTSVNVVSHQLQPIQPSIG
TSKWLVEQAASVATSSNNLSFVENGLPMKPESDGLGVLDPAPFLFPHSFSPSAGTVYSSQ
VPETVIPSKFDSIMFSGPSFDTLPAVSSSTMLASARKNPVSRPVRHFGPPPGFSPVPPQQ
IDESSPALSKSENPLLDDYSWLDGYQLPSSIEATGFKNHNQPAKTYHHANSNSLAGTLCF
PFPGKQVPTTQVHVENQKWQDYQFLNHQKLHQEQQLQLQQQLQKGSQPFTPLLEHQGQPL
WEGRFFV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgactattctgatggataattctttggatctttcatcaagggagcgtgctcagcggctt
tacaacaagaatgttgagttggagagtaggcgcaggaggtcagtccatgcaagaattcct
tcggatcccaatgcatggcaacagatgcgggagaactatgaagcaataatccttgaagac
catgcattttctgaacaacatgaaatagagtatgctctatggcaattgcattataagcga
attgaggagctacgtgcacacttcactactgctctagcctcgacaggtccaaatgcatct
cagagcgggaaaagctctagttctacacgactggaccgaattacaaaaattcgttctcag
tttaaagccttcctttctgaagcaactggattttatcatgatctaatgctgaaaatcaga
gcgaaatatggtctacctcttggatatttctcagatgattccgagaatcagatggttatg
gcaaaagatggaaataagtctgctgagacaaagaaaggcctgatttcttgccaccgttgc
ctgatttacctaggtgaccttgcccgatataaaggcttatatggggaaggtgattccaaa
gttagagattttgcagctgcatcaagttactacatgcaagcctcttcactttggccttca
agtggcaaccctcatcatcagcttgcgattctggcctcctattcgggagatgaattgttg
gcaatttaccgctattttcggagtttggcagttgagagccctttttctacagcaagggac
aacttgattattgcgtttgagaagaaccgtcagagttattcccagcttcatagtgaggtc
aagtcttctccagttaaatctgcacccattcgaatgactgggaaagcaagaggaaaagtt
ggggcgaaacttccctttaaagagaataaaacagaagccagttctatagaggaacggtca
tccagcacatctgaaactttcaaagccttcagcattcgatttgtccgactaaatggaatc
ctttttacacgtacaagtctggagacatttggagaagttttctctatggttagggatgat
ttgcttgagcttctttcctctgggccagaagaggagtacaatttcagttctagtgccaca
gagagtggattactgattgtaaggcttatagccattcttatattcacaattcacaatgtg
aatagggaaactgaaaatcagtcatatgctgaaattttacaacgttcagttctccttcag
aatgcatttactgccatctttgagtttatggggcacattattgagagatgcatacagttg
catgatccttcagttagctatctattgcctggagtgttggtttttgtagaatggttagcc
tgtcatccagatattgctgctggaaaagaagtggaagagaaacaggcttcagctaggtcg
ttcttttggaaccattgtgtcaactacttgaacaagctcttgttgagtgggttgatgttc
acaaatgaggatgaagatgaaagttgtttcttcaatacgagtacgtatgaagtagaaact
gccaaccggcttgcattaatggaggattttgaattgagaggatttctgcctcttcttcct
gcacaacttattcttgatttctccaggaagcattctttaggaagtgatggtacgatcaag
gagcaaaaagcccgcattcagaggattatagcagctgggaaggctcttgtgaatgttgtt
caggttgggcaacagggaatatattttgatcggaagatgatgaagttttctattggtgct
gatcctgaaatttcaaatgatgttgtgctcactagtcctttggaagtgcctgcaataaat
ggtatgggccaaaaacatcccacagagaaaaaagtgaatttgggagttttgctgccaaaa
ggacagcagctacatgttgaaggtgaagacgaggatgaggttattgtcttcaaaccatca
atgactgaaaagcaagctgatatgaatgcctcgggtggtgagtttggaagttatgttggg
tcattgtcagagctacatgatggcaagcaagtacgaaatgcttttgatttgaattcaagg
ccacctacatccgttaatgttgtttcccatcagctgcaaccaatccaaccaagtataggt
acatcgaagtggctggtggaacaagcagcttccgttgccactagttcgaacaatttgagc
tttgtggagaatggactccctatgaaaccagagtcagacggattaggagtattggatcct
gctccatttctttttccacattcttttagtcccagtgcaggcactgtgtattctagtcag
gtccctgaaacagtaataccatctaagtttgattcaattatgttttctggacccagtttt
gatactctgcctgctgtgtcatcttccaccatgctggcaagtgcaaggaagaatccagtg
agccgaccagttaggcactttggtccgccacctggattcagccctgttcctccgcaacag
attgatgagtcctcaccagctctttcaaagagtgagaatccactgttggatgattatagt
tggttagatggctatcagttgccttcatcaattgaagccactggtttcaagaatcacaac
cagccggcaaaaacataccaccatgctaacagcaatagtttagcaggaaccctatgcttt
ccgttccctggaaaacaagttccaactacacaggtccatgttgaaaaccagaaatggcag
gattatcagtttcttaaccatcagaaattacaccaggagcagcagctgcagctgcagcag
caacttcagaaaggaagtcagccatttaccccgctgctggagcatcagggacagcctctt
tgggaaggtcgtttctttgtgtga
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