Malania oleifera: 131168067
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Entry
131168067 CDS
T09312
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
mof
Malania oleifera
Pathway
mof03022
Basal transcription factors
mof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131168067
09124 Replication and repair
03420 Nucleotide excision repair
131168067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131168067
03400 DNA repair and recombination proteins [BR:
mof03400
]
131168067
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131168067
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131168067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
I_LWEQ
GRAM
Motif
Other DBs
NCBI-GeneID:
131168067
NCBI-ProteinID:
XP_057983234
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Position
1:155495756..155515579
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AA seq
606 aa
AA seq
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MATKQVVMRANYKISVKDPGTPGVLKLSEKKFVFVPNDPTSSSKLNVEFRLIKGHKFTKE
GSHRQALLNLTQDPETKGGNYIFEFRTFSDRDVCREFVARVLALLGDANNAVSEKPAFAL
QDEQLSTAEMERRIKLLRVDNELQKLHKQFVLSGVLTEAEFWATRKKLLDGDTSRTPKQR
VGFKSAMISDVKPSTDGRTNRVTFNLTPEIIHQIFSEKPAVHQAFLDFVPNKMTEKDFWE
KYFRAEYLHSTKNPVAAAAEAAEDEELAVFLKRDDILASEARRKIRRVDPTLDIEADQGD
DYMHLPDHGIISKEIIESEYDQYKRTLSQDLNRHSAVVLEGRALDVELRDTRTVAEALAR
SKQVELANEASDGSNSQERQEKTYRMAKIDDLQAPRELPFAPLFIKDPRDYFDSQQVNAL
KTLGDTLAGKKQMKCSLSSQDAYGSLRNSISEVKSIGLTDPIVKPEVAFKVLNGLTQNIS
STKYHLGKNPGESVLDRLPNTTKEELLHHWTSIQELLRHFWSSYPITTAYLYNKASRLKD
AMSQIYPKLQDPYSKKLIGTSRKKGGLYVLEELRVKEFAGSRGKGISAVRFPASSFSSCP
TNASGS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaagcaggttgttatgcgagccaactacaagatttccgtcaaggatcctgga
actcctggtgtgttaaaattgtccgagaagaaatttgtgttcgtgcctaatgatccgaca
tcgtcctcaaaactcaatgtagaattcagattaattaaaggtcacaaatttaccaaggag
ggatcgcatagacaagcactgcttaatcttacccaggatcctgaaaccaagggaggaaat
tacatttttgagtttcgaactttttctgatcgtgatgtctgccgagaatttgtggccaga
gtgcttgcattgctgggagacgccaacaatgcagtttcggaaaaacctgcttttgcactc
caagatgagcaacttagcactgcagaaatggaacgtcggattaagctactacgagtggat
aacgaactgcagaaacttcacaagcaatttgtactcagtggtgtcttgacagaagcagaa
ttttgggccacaagaaagaagctactggatggggacaccagcagaacaccaaaacagcgg
gtggggttcaaaagcgccatgatctcagacgtgaagccatcgactgatggccggacaaac
agagttacgtttaatttaacaccagagattattcatcagattttttctgagaaacctgca
gttcaccaggcattcttggattttgttcctaacaagatgacagaaaaggatttttgggaa
aaatattttagagcagaatatctccatagtacaaaaaaccctgttgctgccgctgcagag
gctgctgaagatgaggaacttgcggttttcttgaaacgtgatgatatattggcaagtgaa
gcccgacggaagattagacgggttgatccaaccttagacatagaagcagatcaaggggac
gattacatgcatcttccggatcatggtataattagcaaggaaattatcgagtccgagtat
gatcaatacaaaagaactctttctcaagaccttaaccggcactcagcagttgtacttgaa
ggaagagctttagatgttgagttgagagacacgaggactgtagcagaggcattggcaagg
tcaaagcaggttgagttagctaatgaagcatctgatgggagcaatagccaggagcggcag
gaaaagacttatcgaatggccaaaatcgatgatcttcaagcacctcgtgaacttccattt
gcgccgctgtttatcaaggatcctcgagactacttcgattctcaacaagttaatgcactg
aaaactttgggggatactttagctggaaaaaaacaaatgaaatgcagcttgagcagccag
gatgcatatggttctttaaggaattccatttctgaggtcaaatctatagggttaaccgat
cccattgttaaacctgaagttgcttttaaggttctaaatggattgacgcaaaatatttca
agcaccaagtatcatctagggaagaatcctggggagagtgttctggatagattgccaaac
acaactaaagaggaattgctacatcattggacgtccattcaggaattgctgaggcatttc
tggtcatcctacccaattacaactgcatatctttataataaggcaagtagattgaaggat
gccatgtcacaaatctacccaaaactacaggatccatattccaagaagctaattgggaca
agccgtaagaaggggggattgtatgtgttagaagagcttcgggttaaagaatttgctggt
tctagaggtaaaggaatcagtgcagtcagatttccggcatcaagtttctcttcttgtcca
accaatgcttcaggctcttga
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