KEGG   Malania oleifera: 131168300
Entry
131168300         CDS       T09312                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
mof  Malania oleifera
Pathway
mof03013  Nucleocytoplasmic transport
mof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131168300
  09122 Translation
   03013 Nucleocytoplasmic transport
    131168300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mof03019]
    131168300
   03041 Spliceosome [BR:mof03041]
    131168300
Messenger RNA biogenesis [BR:mof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     131168300
Spliceosome [BR:mof03041]
 Complex C
  Other components
   EJC/TREX
    131168300
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131168300
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd eIF2A Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Tricorn_2nd Beta-prop_HPS5 Beta-prop_IFT122_2nd Beta-prop_IFT80_2nd WDR90_beta-prop_4th B-prop_COPA_B_2nd Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 PROPPIN DUF7099 WD_LRWD1 Beta-prop_WDR11_1st CNH
Other DBs
NCBI-GeneID: 131168300
NCBI-ProteinID: XP_057983613
LinkDB
Position
1:complement(155818809..155841650)
AA seq 313 aa
MEATVPFKNLHSREYQGHKKKVHSVAWNCSGTKLASGSVDQTARVWHIEPHGHGKVKDVE
LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQTELSGENINITYKPDGT
HIAVGNRDDELTILDVRKFKAIHKRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPTL
RPLDTVMAHTAGCYCIAIDPMGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF
NHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQA
DEGVFRIFGFEST
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggcaacagtcccattcaagaatctccatagcagagaatatcagggccacaagaaa
aaggtgcattccgtcgcgtggaactgctcaggcacgaagcttgcctccggttcggtcgat
cagactgctcgagtttggcacattgagccacacggtcacggtaaggttaaagatgttgaa
ttaaaggggcatactgatagtgtagatcagttatgttgggatcccaaacatgctgatctg
attgcaactgcgtcaggcgacaagacagttcgtctgtgggacgctcggagtggaaaatgc
tcacagcagacagaactcagtggggagaatataaatatcacctacaagcctgatgggaca
cacatagctgttggtaacagggatgatgaactaacaatattggacgtgcgaaaatttaag
gcaatccataagcgcaagttcagttatgaggtgaatgagattgcttggaacatgacagga
gagatgttctttttgacaactggaaatggaacagttgaagttttagcatacccaactctg
agaccacttgacactgttatggcccatacagctggttgctattgcattgcaattgaccca
atgggaagatattttgctgttggaagtgctgattccttagtaagtctatgggatatctca
gagatgctttgtgtgcgaacatttacaaaacttgaatggcctgtgaggacaataagcttc
aatcatacaggagagtatattgcttctgccagcgaggacttattcattgatatatcgaat
gttcagactggacgaaccgtgcatcagattccatgtcgggctgccatgaacagtgtggaa
tggaatcccaaacacaatttacttgcatatgctggagatgacaagaacaaatatcaggct
gatgaaggtgttttccgaatatttgggtttgaaagcacttga

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