Malania oleifera: 131168469
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Entry
131168469 CDS
T09312
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mof
Malania oleifera
Pathway
mof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131168469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mof03041
]
131168469
03009 Ribosome biogenesis [BR:
mof03009
]
131168469
Enzymes [BR:
mof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131168469
Spliceosome [BR:
mof03041
]
Complex A
U1 snRNP components
U1 related factors
131168469
Complex B
131168469
Ribosome biogenesis [BR:
mof03009
]
Eukaryotic type
Pre-60S particles
Helicases
131168469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
131168469
NCBI-ProteinID:
XP_057983897
LinkDB
All DBs
Position
11:complement(54559697..54574915)
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AA seq
812 aa
AA seq
DB search
MAATATVSSGPRYAPEDPTLPRPWRGLVDGKTGYLYFWNPETNVTQYERPAAPGSAAPMK
SSVPLSSSVQVQPSSQGHRRDYSPDKEEDKYSRGSNGGSKLASGAKSQQSARGGTQYPQN
VANGTANFGHGGSSARGLGSSGVGSGLSAESYRRRHEITISGDNVPPPFSTFEDTGFPSE
ILREVHNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYVIPAFIHLKRCRNNSQ
LGPTVLVLSPTRELATQIQDEAVKFGKSSRISCTCLYGGAPKGPQLRDLDRGADIVVATP
GRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPARRQTLMFTATWPKE
VRKIAADLLVNPIQVNIGSVDELVANKSITQYVEVLSIMEKHRRLEQILRSQEPGSKIII
FCSTKKMCDQLSRNLTRQFGAAAIHGDKSQGERDYVLNQFRTGRSPVLVATDVAARGLDI
KDIRVVINYDFPTGIEDYVHRIGRTGRAGATGIAFTFFGDHDAKHASDLMKVLEGANQRV
PPELRDMASRGGGIGRSRRWGSGPGGREGGRGGRSDSGYGGRSDYGGRGGSDYGGRGSWG
VPPSSSRPERSGGRGSDYDSRDRDRYDRGYHDGHDADARGKHDRSYHASHFRAFDRDRER
SRSRSRSRSPDRHDKARDRSPIRGFHKSVMDQARPSPPAQHQHSPTYNSVYSAREVKNLV
DSRSSPGEKLRSPSDNVGGAEGRGGSFNDSAPQQGRSPGRHYDGEYPNRPQSYFGEEEEE
GMIPADDEQGMRMAVDEDGLFQAAEDDEPKGF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactgcaactgtttcttctggtccccgttatgccccagaagaccctacactt
cccagaccatggagaggcctagtggatggtaaaactggctacctttacttctggaatcca
gaaacaaatgttactcagtatgagaggcctgctgccccaggctcagctgcaccaatgaaa
tcttctgtaccgttgagctcttcagttcaagttcagccatcttctcaaggacatcggcgt
gactatagtccagataaagaggaggataagtatagcagaggtagcaatggtggttcaaag
cttgcatcaggagcaaagagtcaacaaagtgctagaggtggaacacaatatccccaaaat
gttgcaaatgggacagccaattttgggcatggagggtcttctgctagagggcttggatct
tcaggtgttggaagtggtctatctgccgagtcctatcgccgtcgacatgaaataacaatt
tctggagataatgtgcctccacctttctctacttttgaggatactgggtttccgtccgaa
attcttagagaggtacacaatgcagggttctctgcccccacaccaattcaggcacagtca
tggccaattgctctccaaagtcgcgacatagtggccattgctaagacaggttcagggaag
acccttggttatgtaattccagcatttattcatctcaagcgctgccgtaataattctcag
ttgggtccaactgtgttggttttgtcaccaacaagggaattggcgacacagatacaggat
gaagccgtaaagtttggaaagtcgtcaagaatttcttgcacgtgtttgtatgggggagca
cccaaaggtccccaactgagggatcttgaccgcggggcggacattgtggttgccactcca
ggccgcttgaatgatatacttgagatgagaagagtcagcctccatcaagtttcttacctt
gtgcttgatgaggcagatcggatgctcgacatgggttttgaacctcagatacggaagatt
gtgaaggaggtgcctgctcgccgccagactctcatgttcactgcaacatggccgaaggag
gttcggaaaattgcggctgatttactagttaatcctatccaggtgaacattggcagtgtt
gatgagcttgttgcaaacaagtccattacccagtatgttgaagtattgtcaatcatggag
aaacacagaaggctggagcagatattgcggtctcaagaaccagggtcgaagattattatt
ttttgttcaactaagaagatgtgtgatcaactttctcgcaatctcacccgccagtttggt
gctgctgccattcatggagataaatctcagggggagagggattatgtgttgaaccagttc
cgcactgggaggtctccagtgcttgtagccactgatgttgcagctcgtgggctggacata
aaagacatcagggtggtcatcaactatgatttccctacaggaattgaggactatgttcac
aggattggaaggactggaagggcaggtgccacaggaattgctttcacattctttggtgac
catgatgcaaagcatgcttcggacctcatgaaggttttggaaggggcaaatcagcgtgtt
cctccagaacttcgcgatatggcttctcgtggcggtggcataggcaggtccagacgctgg
ggttctgggcctggtggtcgtgagggagggcgtggtgggcggagtgattcgggctatggt
ggaaggagtgattatggtggaagaggtggttcagattatggtggtaggggtagttgggga
gttcctccctcttccagcaggcctgaaagaagtggaggccgtggctccgattatgattca
cgtgacagggacaggtatgatcggggatatcatgatgggcatgatgcagatgctcgtggc
aagcatgataggagctaccatgctagccattttcgtgcttttgatagggatagagaacgc
agtcgaagccgcagccgcagccgtagccctgacaggcatgacaaggctcgtgaccgctcc
ccaatccgtggtttccataaatccgtcatggatcaggctcggccatcccctcctgcacag
catcagcattcaccgacatacaacagcgtttacagtgcgagggaagtaaaaaatcttgtg
gattcacgcagctctcccggtgagaagttgcggtcaccatctgataatgttggtggggcg
gaaggccgtggtggatcattcaatgacagtgcacctcaacagggaagatcaccaggcaga
cattacgatggagaataccccaacaggcctcagtcctattttggggaagaagaggaggaa
ggtatgattcctgctgatgatgaacaaggtatgcggatggctgtagatgaggatgggtta
tttcaagcagcagaggacgacgaacccaaagggttttag
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