Malania oleifera: 131168474
Help
Entry
131168474 CDS
T09312
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mof
Malania oleifera
Pathway
mof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131168474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131168474
04121 Ubiquitin system [BR:
mof04121
]
131168474
03036 Chromosome and associated proteins [BR:
mof03036
]
131168474
03400 DNA repair and recombination proteins [BR:
mof03400
]
131168474
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
131168474
Ubiquitin system [BR:
mof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131168474
Chromosome and associated proteins [BR:
mof03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
131168474
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
131168474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-HC5HC2H
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
RTT107_BRCT_5
zf-RING_5
PHD_NSD
zf-Nse
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
131168474
NCBI-ProteinID:
XP_057983910
LinkDB
All DBs
Position
11:complement(54857409..54874984)
Genome browser
AA seq
1032 aa
AA seq
DB search
MADASHLERMGRELKCPICLSLFNCAVSLTCNHVFCNSCIVQSMKSVSSCPVCKVPYRRR
EVRPAPHMDNLVSVYKSMEVASGITIFVTQNAPSTKLSDEGKQVESDCCHGKQETGGACQ
DKAEDKRKSKGKGSKKSFQTNLQNSGPDTTKPSFPTKKRVQVPQNLLSKTPLQPQKCESG
LVESTKEGSKNGSNVINKNPVLYGKGEPVFSPFFWLREDEDAEILSQMMDSDHVMDTPLL
NAPSFSDMKDSDEEMPSDIMQEGKVHSSSNVADCFDSAMFDWTQRPCSPELCSSPIGMQF
GDTDEFDGIQEKELNTFSKSTTAYGQEPFTEAAKTLNTKQRSDVPDFESPSMTHSKNACG
HIETKKSNKKCRKSIATAQKKHKKKSIDQILDTNVNPNIVADSVEETCDRNVNSTNLANI
TNKMSKKTVSDMGVIDSTPDGVPALFVHATHLNEGINMISNLPSAFDNKHGSHEDFNAKT
IQSRERINMQGQKNAFVRSKKRKQGFGKDSILEVPATKTQRNKVAFSELSPLSVPAVDEK
AANFGEKTSQQAREIKSSVNPKCSQRLRCSKKLKVSSDVPKNKMADDIQKGHMKVAAAEE
NQSNGHPDFNDLDHAFTAKIANSGVVLRKCETVPKKFQCAFCHSAEDSEASGEMTHYFNG
MCVKADYNGGCDVIHSHRNCTEWAPNVYFEDEVAINLEAELARSRRIKCSLCGIKGAALG
CYDKGCRRSFHFPCAKLVPQCRWDADNFVMLCPLHASSKLPNEISSSQGKGRKKCILKRQ
SHDPQAKAAAKQDGFSSSHRNLFGSTTKFVLCCSGLTIAEREIVSEFERLSGLKVLKKWN
SSVTHVIASTDENGACRRTLKILMAILEGKWILSIEWIKACMKAMKPVEEGQYEINVDTH
GVKDGPQQGRLRLLNKQPKLFDGMKFHLAGDFEPSYKGYLQDLVIAAGGTVLQRKPISCD
QEAKPSASSTSSTFIIYSLEPPDKCDPNKRNIIFNRRRLDAEALSRSSGAKLATNVWVLN
SIAACKLQSVTE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcttctcatctcgagagaatgggcagagagctcaagtgccccatctgcttg
agtctgttcaattgtgcagtttcactcacatgcaatcatgtattttgcaattcatgtatc
gtccaatctatgaaatcagtttccagttgtccggtgtgtaaagtgccttaccggcggaga
gaggttagaccagctcctcatatggataatttggtgagtgtgtataaaagcatggaagtt
gcttcaggcatcactatatttgtcacccagaatgcaccctcaacaaaattatcagatgaa
ggaaagcaagttgaaagtgattgctgccatggtaagcaagagactggtggagcttgtcag
gataaagcagaagataaaagaaaatcgaaaggaaaaggatccaaaaaatcattccaaacc
aacctacaaaattctggtcctgacactaccaaaccttcctttccaacaaagaaaagagtt
caggtgccacagaatcttctttcaaaaaccccattgcagcctcaaaaatgtgaatctggt
ttggttgaaagtaccaaagaaggatctaagaatggttcaaatgttataaataagaatcca
gttctatatggaaagggagaacccgttttttcaccattcttctggttgagagaggatgag
gatgctgaaatattaagtcaaatgatggactctgatcatgtcatggatacgccactgctg
aatgccccttcttttagtgatatgaaggattcagatgaagaaatgccctctgacataatg
caagaagggaaagtgcatagcagttccaatgttgcagactgttttgatagtgcgatgttt
gactggacgcagcgaccttgttcccctgaactttgttcaagtccaattggaatgcagttt
ggagatactgatgaatttgatggaattcaagaaaaggaattgaacactttctcaaagagt
acaactgcatatggccaagaaccctttactgaagcagcaaaaacactgaataccaaacaa
agaagtgatgttccagattttgagtcaccctctatgacccactccaaaaatgcctgtggt
catattgaaactaaaaagtccaataagaaatgtaggaagtcaattgcaacagcccaaaag
aagcacaaaaagaaaagtattgatcaaattcttgatactaatgtcaatccaaatatagta
gctgattctgttgaggaaacatgtgataggaatgtcaattctacaaaccttgcaaatata
actaataaaatgtctaagaagactgtatctgatatgggagtgatagattcaacacctgat
ggtgttcctgctttatttgttcatgcaacacatctgaatgagggcattaatatgatcagt
aatctgccttctgcatttgataacaaacatggtagtcatgaagattttaatgcgaagacc
atacagagtcgtgaaaggatcaacatgcagggccagaaaaatgcctttgtgagatcaaaa
aagcgaaagcagggtttcgggaaggatagcatacttgaagttcctgcaacaaaaacacaa
agaaacaaggttgcattttctgaattgtcccctttatctgtccctgcagttgatgagaaa
gctgctaattttggggaaaaaacaagccaacaggcaagagaaatcaagtcttcagtgaat
ccaaaatgcagtcaaagattgagatgttcaaaaaagttgaaagtttcctctgatgtccct
aaaaataaaatggctgatgacattcaaaaaggccatatgaaagttgctgctgcagaggaa
aatcaatccaatggtcatcctgatttcaatgatcttgatcatgcattcacagcaaagatt
gccaatagtggagtggttttgcgcaaatgtgagactgttcctaaaaaattccagtgtgcc
ttttgtcattctgcagaagactctgaggcttcaggagagatgacccactacttcaatggc
atgtgtgtcaaagcagattataatggcggatgcgatgtaatacactcccacaggaattgc
actgaatgggcccccaatgtttactttgaagatgaggttgcaatcaatcttgaagctgaa
ttagctagaagtcggaggattaaatgcagtctctgtggaatcaaaggggcagctctaggg
tgttatgataagggctgtcgcaggagtttccattttccttgtgcaaagttggttccacaa
tgtagatgggatgctgataactttgtcatgttatgtcctcttcatgcctcttctaaactg
cctaatgaaatttctagttctcaaggtaaagggaggaagaagtgcattctaaaaaggcaa
tcacatgatcctcaagctaaagctgcagctaaacaagatggcttttcaagttctcatagg
aatttatttggttctactaccaaattcgttctctgttgttcaggtctcacaattgcagaa
agggaaattgtttctgaatttgagaggctctctggacttaaagtgctaaagaaatggaat
tctagtgttacacatgtcattgcatcaacagatgagaatggggcatgcagaagaaccctc
aaaatcttaatggctattttggaggggaagtggatactcagtattgagtggattaaagct
tgcatgaaggccatgaaacctgttgaggaggggcaatacgaaatcaatgttgatactcat
ggagtcaaggatggtcctcagcaaggaagattaagacttcttaacaagcaacccaagctt
tttgacgggatgaagttccaccttgctggggattttgaaccttcttataaggggtatctg
caggatcttgtaattgctgctggtggaactgttctgcaaagaaaacccatttcgtgtgac
caggaagcaaagccatctgcgtcctctacatcatcgaccttcataatttacagtcttgag
ccacctgataagtgtgatcccaacaagaggaatatcatttttaatcgtaggaggcttgat
gcagaagcactctcacgttcatcgggagccaaattagcaaccaatgtgtgggttttgaac
tccattgctgcttgcaagttgcagagtgtaacagaataa
DBGET
integrated database retrieval system
