Malania oleifera: 131168510
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Entry
131168510 CDS
T09312
Name
(RefSeq) uncharacterized protein LOC131168510 isoform X1
KO
K06100
symplekin
Organism
mof
Malania oleifera
Pathway
mof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131168510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131168510
03019 Messenger RNA biogenesis [BR:
mof03019
]
131168510
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131168510
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
131168510
U7-dependent histone pre-mRNA processing factors
131168510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_EZ
mTOR_dom
HEAT_2
Motif
Other DBs
NCBI-GeneID:
131168510
NCBI-ProteinID:
XP_057983979
LinkDB
All DBs
Position
11:complement(71251604..71345231)
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AA seq
1347 aa
AA seq
DB search
MVGVMALRSRDNVTSLVNLAKFATDIPSKLEHLRQLNEDLSRIDPVLLSEFLPQLFEFLC
ERFSPVRKFVTEIIGEIGLKHIRFLPEIVPALLAVLNDGTPAVARQAITCGIDLFRCTLG
KVAIQGLFSSELEDSIESSWAWMLKFKEKIYSIAFQPRSDGIRLLALKFVEAIILLYTPD
PNGTSEPPHQASEGKSVEFNVSWLRGGHPLLNVGDLSTEASQSLGLLLDQLRSATVKTLS
NSTIIVLINSLSAIANKRPAFYGRILPVLLGLDPSTSVIKGVRVSAAHHALKNAFLSCLK
CTHPGAVPWRDRLVGALREMKAGDLAEEALPQECKFNGNIERKDDLPIIEEEKPLIKVQD
AAHGNASRKRPGVQDITELTDEDDSGKRVKPTPNVSEGSLKELNRDATSAQDDIPSIGKT
TSQGDGGDGPVQQLIAMFGALVAQGEKAVSYLDVLISSISPDLLADVVIANMRHLPHNRP
IAEGDEELLLNLASHANIVGNDAQAKNSSSFLTNILSLPRFFPQMASLLDSQCSTSGDGL
KQEGEEECHVSNMTDGNELCAGMNLETEEAVVPTGEPVASSAILPPKMEKDYSAIPSEIH
DMGNLESEIPGLDSASHSDGLPDMVVATSLASTDLEDASQEQASSFGRRSPLNQHPSVST
DRSEELSPKASVTDTSSMVSSTATSIGLNNQIVLPKMSAPVIDLADEQKDHLQKLAFVRI
IEAYKQMALAGCSHVRFSLLASLGVEFPLELDAWKLLQKHILSDYINHEGHELTLQILYR
LFGEAEEERDFFSSTTATSVYEMFLLAVAETLRDSFPASDKSLSRLLSEVPYLPKSVLQV
LESLCSPGNTEKDEKGLQCGDRVTQGLSAVWSLILLRPSIRDVCLKIALQSAVHQLEEVR
MKAIRLVANKLYPISSIAQHIEDYAKKMLLSVANSASATGRVVTEKLSPESHKDSNQEKP
LDELPSISASTKDVYSETQSQSSTTQSISSSSISEAQRCMSLFFALCTKKRSLFREIFVM
YKSTSKAVKQAVHHQIPKLVCTIGSSPELLEIISDPPTGSENLLMQVLHTLTDGTIPSPA
LIFTIRKLYDSKLKDVEILIPILSFLPKEEVLQVFPHVVNLPSEKFQAALARIVQGSSHS
APVLTPAEVLIAIHGIDPDRDGIPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPL
PLLFMRTVLQAIVAFPALVDFIMEILSRLVSKQIWKYPKLWVGFLKCAVLTKPQSFSVLL
QGGFAFQLPPTQLENALNRNAAIKAPLIAHANQPNIRSSLPRSLLVVLGLDSQTSSQTET
IQARTGDTSNPDKEVVAEKTIQSSSAS
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagtgatggccctgagatcgagagacaatgtcacgagtctcgtaaacttggcc
aagttcgccacggacataccttcgaagctcgaacacctgcgccagctgaacgaggactta
tctcgcatcgaccctgttttgctctcggagtttctccctcaactcttcgagttcttgtgt
gaacgcttcagtccagttcgcaagtttgtcacagagataattggtgaaattggtttgaag
catatacgattcttacctgaaatcgttcctgctttgttagctgttctgaatgatggcaca
ccagctgtcgctagacaagccatcacttgtggaattgatttatttcgttgtacacttgga
aaagttgcaattcagggtttattctctagtgagttggaagactcaattgaatcatcatgg
gcatggatgctaaaattcaaggaaaagatatactccatagcatttcagccgagaagtgac
gggataaggttacttgcactgaagtttgttgaagcaataattcttctctatacacctgat
cctaatggtacttcggagccacctcatcaagcctctgaagggaagtcagttgagtttaat
gtatcttggctccgtggaggacaccccctgctcaatgtgggggatttatcgactgaggcc
agtcaaagtttgggtttattgctggaccagcttaggtctgctacagttaaaactcttagt
aactcgacgatcattgtgcttatcaatagtctttcagcgattgcaaataagaggcctgca
ttttacggacgcattctacccgttttgcttggattggatccctcaacgtctgttatcaaa
ggtgtgcgtgtttctgctgcacatcatgctttgaaaaatgccttcctatcctgcctgaag
tgtactcatccgggtgctgtgccgtggcgggatcggttggttggtgccctgagagaaatg
aaggctggagacttggcagaagaagcccttccgcaagagtgcaagttcaatggaaatata
gagcgaaaagatgatttaccaattatagaggaggagaagcccttgattaaagtgcaggat
gctgcacatggtaacgccagcaggaaaagacctggagtacaggatattactgaattgact
gatgaggatgattccggaaagcgagtcaaaccaacaccaaatgtttcagaaggatcattg
aaagagttgaacagagatgctacgtcggctcaggatgacattccttcaattggaaaaact
acttcccaaggtgatggaggtgatggacctgtgcagcaacttattgctatgtttggtgcc
ttggttgctcagggtgaaaaagctgttagttatttagatgtccttatttcaagtatctcc
cctgacttgctagctgatgtagtaatagctaatatgaggcaccttccccataatcgccct
attgctgaaggggatgaagaactgctgctgaacttggcctctcatgcaaatattgttggt
aatgatgctcaggcgaagaattcatcgtcattcttgaccaatattctttcacttcccaga
ttttttccacagatggcttcattattagacagtcaatgctcgacatctggtgatggtttg
aaacaagaaggcgaagaggaatgccatgtatcaaatatgactgatggaaatgagctgtgt
gctggcatgaatcttgaaacagaagaagctgttgtgcctaccggtgaaccagttgcttct
agtgccattctaccacctaaaatggaaaaggattattccgccattccgtcggagattcat
gatatggggaatctagagagtgagatacctggattggattcagcttctcatagtgatgga
ttgccagacatggtggttgctacttcattggcatctactgatttagaagatgcaagtcaa
gaacaagcttccagttttggtagaaggtcgccactgaatcaacatccatctgtgtcaact
gataggtctgaggagctgagcccaaaagcatctgtcacagatactagcagcatggtctcc
tcaacagcgacttctattgggttgaataatcagattgtcctccccaagatgtcagcacct
gtaattgatcttgctgatgaacagaaggatcacttacaaaaattggcttttgtgcgcatc
attgaggcttataagcaaatggcacttgcaggatgttctcatgttcgcttctctttgctt
gcttctttaggtgttgagtttcctttagaattagatgcatggaaactactgcaaaagcat
atactgtccgattatataaatcacgaggggcatgaattgaccttgcaaatcctctaccgg
ttgtttggggaagcagaagaagaacgagatttcttttcttctacaactgctacttctgta
tatgagatgttcctgctggctgtggcagaaacacttagagattcttttccagcttctgac
aagtctttaagtagactgctcagtgaagttccttatctgccaaaatcagttcttcaagta
ttggagtccttatgttctcctggaaacactgagaaagatgagaagggattgcaatgcgga
gatcgtgttacacaaggtcttagtgctgtgtggagcctgattttgttgaggccatctatt
cgagacgtttgcttgaaaattgctttgcagagtgcagttcatcaattagaagaagtgcgt
atgaaggcaatacgactggtggcaaataagctttatccaatatcatccattgctcaacat
atagaagattatgcaaagaaaatgttgttgtctgttgcgaacagtgcttcagctactggc
agagttgtgactgaaaaattaagtcctgaatcacataaggattctaatcaggaaaagcct
ttggatgaacttccatctataagtgccagcaccaaagatgtctactctgaaactcaatcc
caatcatccacaactcaaagcatatcttcatcttcaatctctgaggcacagcggtgcatg
tcactattttttgcattgtgtacaaagaaacgctccctttttcgtgaaatatttgttatg
tataaaagcacatcgaaggcagtaaagcaggcagttcatcaccagattcctaaactagtt
tgcactataggctcatcacctgaacttcttgaaattatctcagacccaccaactggaagt
gagaatcttttaatgcaggttttgcatacactgacagatggtactattccttctccagca
ctaatatttaccattaggaagttgtatgattcaaaattaaaggatgtagagattcttata
cctatattgtcttttctacccaaagaagaggttttacaagttttcccccatgttgttaat
ctcccatcagagaagttccaagcagcacttgcccgtatagtgcagggttcatctcattct
gctccagtgcttactccagctgaagttctgattgccatccatgggattgatcctgacaga
gatggaatacccttgaagaaggtcactgatgcatgcaatgcttgttttgagcagcggcaa
atattcacacagcaagtccttgcgaaggtcttaaatcaattggttgagcagattcctctt
cccttactattcatgcgtactgtattacaagctatagttgcttttccagctctggtggac
ttcataatggaaatcctttctcgtcttgtgagcaagcagatatggaagtacccaaagtta
tgggtaggattcttgaaatgtgcagtcttaacgaagccccagtctttcagtgtgttgctt
cagggtggttttgcctttcagctacctccgacgcagcttgaaaatgcattgaatagaaat
gctgcaattaaggcacccttgattgctcatgcaaatcaacctaatatccgttcgtcactt
ccaaggtccctgttggtggttctcggattagattctcaaacttcaagtcagacagaaaca
attcaagctcgaacaggagatacaagcaacccagataaggaggtggtggcagaaaagact
attcaatcatcaagcgctagctga
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integrated database retrieval system
