Methylobacterium organophilum: MMB17_02285
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Entry
MMB17_02285 CDS
T08093
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mog
Methylobacterium organophilum
Pathway
mog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMB17_02285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mog03019
]
MMB17_02285
03009 Ribosome biogenesis [BR:
mog03009
]
MMB17_02285
Enzymes [BR:
mog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MMB17_02285
Messenger RNA biogenesis [BR:
mog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMB17_02285
Ribosome biogenesis [BR:
mog03009
]
Prokaryotic type
rRNA helicases
MMB17_02285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UMY18202
LinkDB
All DBs
Position
505367..507058
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AA seq
563 aa
AA seq
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MPFPTLPAPLARALADRNYAEPTPVQQAVLDTEAGRDLLVSAQTGSGKTVAFGLAIAETL
LGGAETLPPPDAPLALAIAPTRELALQVQRELSWLYAATGARVVANVGGMDPRKEARALD
AGAHIVVGTPGRIRDHLERGRLRTEALRAVVLDEADEMLDMGFREDLEFILSATPSERRT
LLFSATLPKLIVALAERYQRDALRLAVAGETRGHADIAYRAVRVLPREIEHAVVNVLRYV
DAPTSIVFCNTRDGVRHLQASLNERGFSAVALSGELGQGERNAALQALRDGRARVCVATD
VAARGIDLPGLDLVIHADLPHDAEVMQHRSGRTGRAGRKGTSVLLVPPARRRRAEQMFAI
AKVNPSWSGPPTADEIRSLDRERMLADPLLTEPVSEEDKDWAEALLANLAPEVLAGALAR
IYRSRIPVPEEVTELAADPPRRERTALERDQALALGAPRVGEDGPSAWFRLNLGKRDNAE
PRRLLPMLTRRGQIGRGDIGAIRIFERETKFEIRGSAAAAFAEAFRHRGSDDLQIERVPG
DESPPPKKHKSPRATKHARRAGK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttcccgactcttccggccccgctcgcgcgggcgctcgccgatcgcaactatgcc
gagcccacgccggtgcagcaggccgtgctcgacacggaggccggccgcgacctgctcgtc
tccgcccagaccggctcgggcaagacggtggccttcggcctcgccatcgccgagaccctg
ctcgggggcgccgagaccctgccgccccccgacgcgcccctggcgctcgccatcgccccg
acccgggagctcgccctgcaggtgcagcgggagctgtcctggctctatgccgccaccggc
gcccgcgtggtcgccaatgtcggcggcatggatccgcgcaaggaggcccgggcgctcgat
gccggcgcgcatatcgtggtcggcacgccgggccgcatccgcgaccatctggagcgcggg
cgcctgcgcacggaggccctgcgcgccgtcgtcctcgacgaggccgacgagatgctcgac
atgggcttccgcgaggatctcgaattcatcctctcggccacgccctccgagcggcgcacg
ctcctgttctccgccaccctgccgaagctgatcgtggcgctggccgagcgctaccagcgc
gacgccctgcggctggccgtggccggcgagacccgggggcatgccgacatcgcctaccgg
gccgtgcgcgtgctgccgcgggagatcgagcacgcggtggtcaacgtgctgcgctacgtc
gatgcgccgacctccatcgtcttctgcaacacccgcgacggcgtgcgccatctccaggcc
tcgctgaacgagcgcggcttctcggcggtggcgctctcgggcgagctcggccagggcgag
cgcaacgccgcgctccaggccctgcgcgacggccgcgcccgggtctgcgtcgcgacggac
gtcgccgcccgcggcatcgacctgccgggcctcgacctcgtgatccatgccgacctgccc
cacgacgcggaggtgatgcagcaccgctccggccgcaccggccgggccggccgcaagggc
accagcgtgctgctggtgccccccgcccggcgccggcgcgcggagcagatgttcgccatc
gccaaggtgaacccctcctggagcgggccgcccacggccgacgagatccgcagcctcgac
cgggagcgcatgctcgccgacccgctgctcaccgagccggtctcggaggaggacaaggac
tgggccgaggcgctgctcgccaacctcgcgccggaggtgctcgccggggcgctcgcccgg
atctaccgctcgcgcatccccgtgccggaggaggtgacggagctcgccgccgacccgccg
cggcgggagcgcaccgccctggagcgcgaccaggccctggccctcggcgcgccgcgggtg
ggcgaggacggcccctccgcctggttccggctcaatctcggcaagcgcgacaatgccgag
ccgcgccgcctgctgccgatgctgacccggcgcggccagatcggccgcggcgatatcggc
gcgatccgcatcttcgagcgcgagaccaagttcgagatccgcggcagcgcggccgccgcc
ttcgccgaggccttccggcaccgcggctcggacgacctgcagatcgagcgcgtccccggc
gacgagtcgcccccgcccaagaagcacaagagcccccgggcgaccaagcacgcccgccgc
gcgggcaagtag
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