Methylobacterium organophilum: MMB17_05315
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Entry
MMB17_05315 CDS
T08093
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mog
Methylobacterium organophilum
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mog03032
]
MMB17_05315
03400 DNA repair and recombination proteins [BR:
mog03400
]
MMB17_05315
Enzymes [BR:
mog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MMB17_05315
DNA replication proteins [BR:
mog03032
]
Prokaryotic type
DNA Topoisomerases
MMB17_05315
DNA repair and recombination proteins [BR:
mog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MMB17_05315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
UMY18743
LinkDB
All DBs
Position
1159377..1160558
Genome browser
AA seq
393 aa
AA seq
DB search
MAAETNEGGPGDLREAAAEAGLRYVDDGKPGLTRRKSGKGFRYLDARGAPVRDAKVLARI
RSLAIPPAYTDVWICPSANGHIQATGRDAKGRKQYRYHPEFRQAREATKFGRMMAFAEAL
PGIRARIDADMRKRGLCREKVLATVVHLLESTLIRVGNDDYARSNRSYGLTTLRDPHVTI
EGSEIRFRFKGKSGKAWNLSLRDRRVARIVKACQDLPGQELFQYLDDDGERRDVTSSDVN
DYLRAITGEDITAKDFRTWAGTVLAALALREFEAFDSQAKAKSNLRTAIEAVASRLGNTP
TICRKCYVHPEILDCYLEGALLFQVKEAVEDELANGLYALKPEEAAVLGLLRTRLAQEAK
AAVKAAKKPAAGKRSAARRTGTTRASGGSRCAA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagacgaacgagggcgggccgggcgatctgcgcgaagccgcggccgaggcg
gggctgcgctacgtcgacgacggcaagccgggcctgacccggcgcaagagcggcaagggc
ttccgctatctcgacgcccggggggcgccggtgcgcgacgccaaggtgctcgcccgcatc
cgttcgctggccatcccgccggcctataccgacgtctggatctgccccagcgccaacggc
cacatccaggcgacggggcgcgacgccaagggccgcaagcagtaccggtatcaccccgag
ttccggcaggcccgggaagccaccaagttcgggcggatgatggccttcgccgaggccctg
cccggcatccgcgcccgcatcgacgccgacatgcgcaagcgcggattgtgccgggagaag
gtgctcgcgacggtggtccacctgctggagagcacgctgatccgcgtcggcaacgacgac
tatgcccgttcgaaccggagctacgggctgaccaccctgcgcgacccgcatgtgacgatc
gagggctcggagatccgcttccgcttcaagggcaagagcggcaaggcatggaacctgtcc
ctgcgcgaccggcgcgtcgcccggatcgtgaaggcctgccaggacctgccgggccaggag
ctgttccagtatctcgacgacgacggcgagcgccgggacgtcacctcctcggacgtcaac
gactacctgcgcgcgatcaccggcgaggacatcaccgccaaggatttccgcacctgggcg
ggcaccgtgctcgcggccctggccctgcgggaattcgaggccttcgacagccaggccaag
gccaagagcaacctgcgcaccgcgatcgaggcggtggcgagccgcctcggcaacacgccg
acgatctgccgcaagtgctacgtgcacccggagatcctcgactgctacctggagggcgcc
ctgctgttccaggtgaaggaggcggtggaggacgagctcgccaacggcctctacgcgctc
aagccggaggaggcggccgtgctcggcctcctgcggacgcggctcgcgcaggaggccaag
gccgcggtgaaggcggcgaagaagccggccgccggcaagcgcagcgccgccaggcggacc
ggcaccacccgggccagcggcggcagccggtgcgcggcctga
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