Methylobacterium organophilum: MMB17_08870
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Entry
MMB17_08870 CDS
T08093
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mog
Methylobacterium organophilum
Pathway
mog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMB17_08870 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mog03019
]
MMB17_08870 (recQ)
03400 DNA repair and recombination proteins [BR:
mog03400
]
MMB17_08870 (recQ)
Enzymes [BR:
mog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MMB17_08870 (recQ)
Messenger RNA biogenesis [BR:
mog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MMB17_08870 (recQ)
DNA repair and recombination proteins [BR:
mog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MMB17_08870 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
UMY19390
LinkDB
All DBs
Position
complement(1906983..1908845)
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AA seq
620 aa
AA seq
DB search
MTARLDEARAALRKTFGYDDFRPGQDEVIGAVLDGEHVFAVMPTGSGKSMTYQLPALVDA
GLTVVVSPLIALMHDQVQQMRAFGIEAATLNSTVTESESREAWRKIRNGELRLLFVSPER
LLMEGCMDALCGAGVRRLAVDEAHCVSQWGHDFRPEYRELARVREALGNVQTLALTATAD
QATQADISERLFPAGRPPRTFVHSFDRPNIRLTFEPKDNPTRQLERFLRPRRSESGIIYC
SSRKRVEQLADSLKADGFKAFPYHAGLDQGTRMRNQDTFLQEDGVVMTATVAFGMGINKP
DVRFVCHADMPTNVEGYYQEIGRAGRDGLPADTLTLYGLDDMALRRRQIDEKEIPDERRR
VERRKLEAMIALCEGATCRRESLLAYFGETSAPCGRCDLCRGGVTLIDGTVPAQKLLSAI
VRTGQRYGAAYVCDLVHGKESEQIRRNGHAALKTFGVGADKPVVAWRAILRQLFAAGAVA
ENADGYGGLSMTEKGEAILFGRDRIELRPDPEPRKAESRSRRSAPREDDALQLGEADEAL
FQHLRGLRATIARAEGIAAFMVFPDRTLIEMARAKPVDLWALRSVHGVGERKREAYGERF
VTAIAEFLADDGQRRRTITG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcgcctcgacgaggcccgtgccgcgctccgaaagaccttcggctacgacgat
ttccggcccggccaggatgaggtgatcggggcggtgctcgacggcgagcacgtcttcgcc
gtgatgccaaccgggtcgggcaagtcgatgacctaccagctcccggctctggtggatgct
ggattgacggtggtggtctcgccgctgatcgccctgatgcacgatcaggtgcagcagatg
cgcgccttcggcatcgaggcggcgacgctgaattccacggtgaccgagtccgaatcgcgc
gaggcttggcgcaagatccggaacggcgagttgcgcctgctcttcgtctcgccggagcgg
ctgctgatggaaggctgcatggacgccctgtgcggggccggcgtgcgccgtctcgccgtg
gacgaggcccattgcgtctcgcaatgggggcacgacttccggccggaataccgcgagctc
gcccgtgtccgcgaggcgctgggcaacgtgcagacgctggccctcaccgccaccgccgac
caggcgacgcaggccgacatctccgagcggcttttcccggccggccggccgccgcggacc
ttcgtccattccttcgatcggccgaacatccggctgacgttcgagcccaaggacaatccg
acacggcagttggagcgtttcctgcgcccccggcgctcggagagcggcatcatttattgc
tcgtcccgcaagcgggtggagcagctcgccgacagcctcaaggcggatggcttcaaggcc
ttcccctaccatgccgggctcgaccagggcacgcgcatgcgcaaccaggacaccttcctg
caggaggacggggtggtgatgaccgccaccgtcgccttcggcatggggatcaacaagccc
gacgtgcgcttcgtctgccatgccgacatgccgaccaatgtcgagggctattaccaggag
atcggccgcgccggccgcgacggcctgcccgcggacacactcaccctctatggccttgac
gacatggccctgcggcgccgtcagatcgacgagaaggagatcccggacgagcggcgccgg
gtcgagcgccgcaagctcgaggcgatgatcgcgctctgcgagggcgcgacctgccgccgc
gagtcgctgctggcctatttcggcgagaccagcgccccctgcggccgctgcgacctctgc
cgcggcggggtgaccctgatcgacggcaccgtccccgcccagaagctcctttccgcgatc
gtgcgcaccgggcagcgctacggcgcggcctatgtctgcgacctcgtgcacggcaaggag
agcgagcagatccgtcgcaacggccacgccgccctcaagaccttcggcgtcggcgccgac
aagccggtcgtggcttggcgcgcgatcctacgccagctcttcgcggcaggcgcggttgcc
gagaacgccgacggctatggcggcctgtccatgaccgagaagggcgaggcgatcctattc
ggtcgcgaccggatcgagctgcgccccgatccggagccacgcaaggccgaatcccgcagc
cggcgttccgccccccgcgaggacgacgcccttcagctcggcgaggcggacgaggccctg
ttccagcacctgcgcggtctgcgcgccactatcgcccgggcggaaggcatcgccgccttc
atggtcttccccgaccggacgctgatcgagatggcccgcgccaagcccgtcgatctctgg
gccctacgctcggtccacggggtcggcgagcgcaaacgcgaggcctatggcgagcgcttc
gtgaccgcgatcgcggaatttctggccgatgacgggcagcgccgccggacgatcacgggc
tga
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