Methylobacterium organophilum: MMB17_12000
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Entry
MMB17_12000 CDS
T08093
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mog
Methylobacterium organophilum
Pathway
mog00300
Lysine biosynthesis
mog00470
D-Amino acid metabolism
mog01100
Metabolic pathways
mog01110
Biosynthesis of secondary metabolites
mog01120
Microbial metabolism in diverse environments
mog01230
Biosynthesis of amino acids
Module
mog_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MMB17_12000 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MMB17_12000 (lysA)
Enzymes [BR:
mog01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MMB17_12000 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UMY19952
LinkDB
All DBs
Position
complement(2591592..2592860)
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AA seq
422 aa
AA seq
DB search
MHHFHYRNGRLQAEEVDLTALAAQVGTPFYCYSTATLERHYRVFAEAFSGDDALVCFAMK
ANSNQAVLATLARQGAGMDIVSEGELHRALAAGVDPKKIVFSGVGKTRNEMAAALQAGIY
CFNVESEPELDVLSEVALSLGKRAPVSIRVNPDVDAGTHAKISTGKYENKFGIPITRAPT
VYAHAATLKGIAVTGVDMHIGSQITDLTPFDNAARLLAELARALMAQGHTLDHIDFGGGL
GIPYREDNAPPPDPAALARILRPHFQPLGLRPVFEIGRMIAGNAGILLTHVIYVKKSEGR
TFVIVDAAMNDLIRPTLYEAFHALRPVAEPASDTPRIVADVVGPVCESGDYLALSRDMPE
VAPGDLLAVMTAGAYGAVQSGTYNTRRLVPEVLVRADKAAIVRPRPTYQDLIGLDHLPDW
LT
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaccatttccactatcgcaacggccgcctccaggccgaggaggtcgacctcaccgcg
ctcgccgcccaggtcggcacgcccttctactgctacagcacggcaacgctggagcggcat
taccgcgtgttcgcggaggcgttctcgggcgacgacgccctggtctgcttcgcgatgaag
gcgaattccaatcaggcggtgctcgccaccctcgcccgccagggcgcgggcatggacatc
gtatccgagggcgagttgcaccgggctttggcggccggggtcgaccccaagaagatcgtc
ttctccggcgtcggcaagacccgcaacgagatggctgcggccctccaggccggcatctac
tgcttcaacgtggagagcgagcccgagctcgacgtgctctccgaggtcgccctgtccctc
ggcaagcgcgcgccggtctcgatccgggtgaacccggacgtggatgccggcacccacgcc
aagatctccacgggcaagtacgagaacaagttcggcatcccaatcacccgggcgcccacg
gtctatgcccatgccgccaccctgaagggcatcgccgtcaccggcgtcgacatgcatatc
ggcagtcagatcacagacctgacgcccttcgacaacgcggcgcggctcctcgccgaactc
gcccgcgcactgatggcccaggggcacacgctcgaccatatcgatttcggcgggggcctc
ggcatcccctatcgcgaggacaacgcgcccccgccggacccggcggcgctggccaggatc
ctgcgcccgcatttccagccgctcggcctgcgcccggtcttcgagatcggccggatgatc
gcaggcaatgcgggcatcctgctcacccacgtgatctacgtgaaaaagagcgagggccgc
accttcgtcatcgtcgatgcggcgatgaacgacctgatccgcccgaccctctacgaggcc
ttccacgctctgcgcccggtggcagagcccgcctccgacacgccccggatcgtcgccgac
gtggtcggcccggtctgcgagagcggcgattacctcgccctgtcccgggacatgcccgag
gtcgccccgggcgacctgctcgcggtgatgacggcgggcgcctatggcgcggtccagtcc
ggcacctacaacacccgccgcctcgtgcccgaggtgctggtgcgcgccgacaaggccgcc
atcgtgcgcccgcgcccgacctaccaggacctgatcggcctcgaccatctgccggactgg
ctgacctga
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