Methylobacterium organophilum: MMB17_16035
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Entry
MMB17_16035 CDS
T08093
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mog
Methylobacterium organophilum
Pathway
mog03030
DNA replication
mog03410
Base excision repair
mog03420
Nucleotide excision repair
mog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMB17_16035 (polA)
03410 Base excision repair
MMB17_16035 (polA)
03420 Nucleotide excision repair
MMB17_16035 (polA)
03440 Homologous recombination
MMB17_16035 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mog03032
]
MMB17_16035 (polA)
03400 DNA repair and recombination proteins [BR:
mog03400
]
MMB17_16035 (polA)
Enzymes [BR:
mog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MMB17_16035 (polA)
DNA replication proteins [BR:
mog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMB17_16035 (polA)
DNA repair and recombination proteins [BR:
mog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MMB17_16035 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMB17_16035 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UMY16221
LinkDB
All DBs
Position
3426375..3429509
Genome browser
AA seq
1044 aa
AA seq
DB search
MTVETQPAHDPVGANDRVILVDGSSFIFRAYFQSINQDQKYNTRPSDGLPTGAVRLFCTK
IAQFLQDGAAGVKPTHLGIVFDKSEGSFRKELFPDYKGHRPDAPDDLKRQMPLMRDAVRA
FGLHAVELERYEADDLIATYARQAEARGAEVIIVSSDKDLMQLVSDRIRFYDFESGAKGK
PGYRPERNLDREAIIAKWEGLSPEQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEYGS
LEQLLERAGEIKQPKRRETLLANLDQARLSRKLVALEEDVPVPVPLDDLGVPEPDPEKLV
GFLKAMEFNTLTRRIAQMLHVDPEAVKPDPALLPGARPHGYENAAGGSDAVPFFGDSVPV
DPETAAAPERGAGARPPETGEVDPFADLGLPDAAPKPRATEPTPAGVVAARAAEAVKPFD
TSAYETITTLAQLEAWIAEAFEAGVVAVDTETDALDANRAGLVGVSLATAPGRAAYIPLA
HVKPDTKDGDLFGEAAQDGEAADQTITQIPLDQAIAALKPLLEDPGTLKIGQNIKYDWLV
LKRYGIEVGPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFTDVTGTGRNKLTFDR
VPLNKATAYAAEDADVTLRLWRMMKPRLVAEKRVAVYETLERPLVPVLARMEANGIRIDR
DMLSRLSGDFSQILARLEEEIQEDAGERFQVSSPKQIGDVLFGKMGLPGAKKTPSGQWAT
PATLLEELAQAGHALPRKILEWRQLSKLKSTYTDTLQEHADRQTNRVHTSFALAATTTGR
LSSSDPNLQNIPIRTEEGRRIRRAFVAPEGTKLISADYSQIELRILAHIADIPQLRQAFE
DGIDIHAATASAMFGVPLAEMTPDLRRRAKTINFGIIYGISAFGLADRLGIGREEASAFI
RQYFERFPGIRDYIEGTKKLCRDKGYVTTLFGRVCHYPQIRSNNPSERASVERQAINAPI
QGTAADIIRRAMTRMEDALRKEHLNLRMLLQVHDELVFEAPEEEIEAALPVIARVMEQAP
APALTLRVPLVVEAKAAGNWQEAH
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgagacccagcctgcccacgaccctgtcggggcgaatgaccgcgtgatcctg
gtggacggctcgtccttcatcttccgcgcctattttcagtcgatcaaccaggaccagaag
tacaacacccgcccctcggacggcctgccgaccggcgccgtgcggctgttctgcaccaag
atcgcccagttcctgcaggacggcgccgcgggggtgaagccgacccatctcggcatcgtc
ttcgacaagtccgagggctcgttccgcaaggagctcttccccgactacaagggccaccgc
ccggacgcgcccgacgatctcaagcggcagatgcccctgatgcgcgacgcggtgcgcgcc
ttcggcctgcacgcggtggaattggagcgctacgaggccgacgacctgatcgcgacctat
gcccggcaggcggaagcccggggcgccgaggtgatcatcgtgtcctccgacaaggacctg
atgcagctcgtctcggaccggatccggttctacgacttcgaatccggcgccaagggcaag
cccggctaccgccccgagcgcaacctcgaccgcgaggcgatcatcgccaagtgggagggg
ctgagcccggagcagatcggcgacgccctggcgctgatcggcgacacctcggacaacgtg
cccggcgtgcccggcatcgggctcaagaccgccgccgccctcatcaaggaatatggcagc
ctggagcagctgctggagcgggccggcgagatcaagcagcccaagcgccgcgaaaccctg
ctcgccaatctcgaccaggcccggctctcgcggaagctcgtggccctggaagaggacgtg
ccggtgccggtgcccctcgacgatctcggcgtgccggagcccgaccccgagaagctcgtc
ggcttcctcaaggcgatggagttcaacaccctgacgcggcgcatcgcccagatgctgcat
gtcgaccccgaggcggtaaagcccgacccggcgctgctgcccggcgcccggccccacggc
tacgagaacgccgccggcggcagcgacgccgtgcccttcttcggggattccgtgccggtc
gatcccgagaccgcggcggcgccggagcgcggggccggcgccaggcccccggagactgga
gaggtcgatcctttcgccgatctcggcctgccggatgcggcgccgaagccccgcgccacc
gagccgacgccggccggcgtggtcgcggcccgggcggcggaggcggtcaagcccttcgac
accagcgcctacgagacgatcacgaccctggcgcaactcgaagcctggatcgcggaggcc
ttcgaggcgggcgtcgtcgcggtcgataccgagacggacgccctcgacgccaaccgcgcc
ggcctcgtcggcgtctccctcgcgaccgctccgggccgcgcggcctatattcctctcgcc
cacgtgaagcccgacacgaaggacggggacctgttcggcgaggcggcccaggacggcgag
gccgcggaccagacgatcacccagattcccctcgatcaggcgatcgccgccctcaagccg
ctgctggaggatccgggcaccctgaagatcggccagaacatcaagtacgactggctggtg
ctgaagcgctacggcatcgaggtcggacccttcgacgacaccatgctgatctcctacgtg
ctcgatgccgggaagggcggccacggcatggacgagctcgcccgccggcatctcggccac
cagccgatcaccttcaccgacgtgaccggcaccgggcgcaacaagctgaccttcgaccgc
gtgcccctcaacaaggcgaccgcctacgccgccgaggatgccgacgtgaccctgcgcctg
tggcgcatgatgaagccgcgcctcgtcgcggagaagcgcgtcgcggtctacgagaccctg
gagcggcccctcgtacccgtgctcgcccgcatggaggccaacggcatccgcatcgaccgc
gacatgctgagccgcctctcgggcgacttctcgcagatcctggcgcggctcgaggaggag
atccaagaggatgccggcgagcgcttccaggtctcctcgcccaagcagatcggcgacgtg
ctcttcggcaagatgggcctgcccggcgccaagaagacgccctcgggccaatgggccacg
ccggcgacgctcctggaggagctcgcccaggccgggcacgcactgccccggaagatcctg
gaatggcgccagctctcgaagctgaaatcgacctataccgacacgctgcaggagcatgcc
gatcggcagacgaaccgcgtccacacctccttcgcgctggccgccaccaccacgggccgg
ctctcctcctcggacccgaacctgcagaacatcccgatccgcacggaggagggacggcgc
atccgccgggccttcgtggcgcccgagggcaccaagctgatctcggcggactactcgcag
atcgaattgcgcatcctcgcccacatcgccgacatcccgcagttgcgccaggccttcgag
gacggcatcgacatccacgcggcgaccgcctcggccatgttcggcgtgcccctcgccgag
atgacgccggatctgcgccggcgggccaagaccatcaatttcggcatcatctacggcatc
tcggccttcggcctcgccgaccgcctcggcatcggccgggaggaggcctcggccttcatc
cggcagtatttcgagcgcttccccggcatccgcgactatatcgagggcacgaagaagctc
tgccgcgacaagggctacgtcaccaccctgttcggccgggtctgccactatccccagatc
cgctccaacaacccgagcgagcgggcgagcgtggagcgtcaggcgatcaacgccccgatc
cagggcaccgcggccgacatcatccgccgggccatgacccggatggaggacgccctgcgc
aaggagcatctcaacctgcgcatgctcctgcaggtgcatgacgaactcgtcttcgaggcg
cccgaggaggagatcgaggcggcgctgccggtgatcgcccgggtgatggagcaggcgcca
gccccggccctgaccctgcgcgtgcctctggtggtggaggccaaggccgccgggaactgg
caggaagcgcattga
DBGET
integrated database retrieval system
