Methylobacterium organophilum: MMB17_16280
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Entry
MMB17_16280 CDS
T08093
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mog
Methylobacterium organophilum
Pathway
mog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MMB17_16280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mog03021
]
MMB17_16280
03400 DNA repair and recombination proteins [BR:
mog03400
]
MMB17_16280
Enzymes [BR:
mog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MMB17_16280
Transcription machinery [BR:
mog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MMB17_16280
DNA repair and recombination proteins [BR:
mog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MMB17_16280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UMY16269
LinkDB
All DBs
Position
3471104..3472123
Genome browser
AA seq
339 aa
AA seq
DB search
MVIQKNWQELIKPNKLQVSAGDDPKRVATVVAEPLERGFGTTLGNSLRRVLLSSLQGAAV
TSVQIDGVLHEFSSIPGVREDVTDIVLNIKTIALRSQSDQPKRMTLRKTGPGLVTAGDIS
VVGDIQVLNPDLVICTLDDGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDALFSPV
TKVSYRVETTREGQDLDKDKLTMTVETNGAVSPEDALAYAARIIQDQLQVFVNFEEPRKE
EAAPLAPQLPFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEGEMLRTPNFGRK
SLNEIKEVLAGMGLHLGMDVPGWPPENIEDLAKRFEEHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtcattcagaagaactggcaagagctcatcaagccgaacaagcttcaggtctcggcc
ggggacgaccccaagcgcgtcgccaccgtcgtggccgagcccctcgagcgcggcttcggc
accacgctcggcaactcgctgcgccgcgtgctcctgtcctcgctccagggcgcggccgtc
acctccgtccagatcgacggcgtgctgcacgagttctcctcgatcccgggcgtgcgcgag
gacgtcaccgacatcgtcctcaacatcaagaccatcgccctgcgctcgcagtccgaccag
cccaagcgcatgaccctgcgcaagaccggcccgggcctcgtcaccgcgggcgacatcagc
gtcgtcggcgacatccaggtgctgaaccccgacctcgtgatctgcaccctggacgacggc
gccgagatccgcatggagttcacggtcgccaccggcaagggctacgtcccggccgagcgc
aaccgccccgaggacgcgccgatcggcctgatcccggtggacgccctgttctcgccggtg
accaaggtgagctaccgcgtcgagactacccgcgagggccaggatctcgacaaggacaag
ctgaccatgacggtcgagaccaacggcgccgtgtcgccggaggatgccctggcctatgcc
gcgcgcatcatccaggaccagctccaggtcttcgtgaacttcgaggagccccgcaaggaa
gaggccgcgccgctcgcgccgcagctgcccttcaacccggccctgctcaagaaggtggac
gagctggagctgtcggtccgttcggcgaactgcctgaagaacgacaacatcgtctatatc
ggcgacctcatccagaagtccgagggcgagatgctgcgcaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctggctggcatgggcctgcacctcggcatggacgtt
cccggctggccgccggagaacatcgaggatctcgccaagcgcttcgaagagcactactga
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