Methylobacterium organophilum: MMB17_23935
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Entry
MMB17_23935 CDS
T08093
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mog
Methylobacterium organophilum
Pathway
mog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MMB17_23935 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mog03021
]
MMB17_23935 (rho)
03019 Messenger RNA biogenesis [BR:
mog03019
]
MMB17_23935 (rho)
Transcription machinery [BR:
mog03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MMB17_23935 (rho)
Messenger RNA biogenesis [BR:
mog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MMB17_23935 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
AAA_25
AAA
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UMY17621
LinkDB
All DBs
Position
complement(5057904..5059247)
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AA seq
447 aa
AA seq
DB search
MTSSNDALAPADIPAEPTLAATDLDTVREVKLQDLKSKTPTELIAFAEEVEVENASTMRK
QELMFAILKQLAAKEVEIIGSGTVEVLQDGFGFLRSSDSNYLPGPDDIYISPTQIRRFGL
RTGDTVEGPIRGPKDGERYFALIKVNTINFENPEKIKHKVHFDNLTPLFPTKRFKLELDN
PTKKDFSPRIIDIVSPIGKGQRALIVAPPRTGKTVLMQNIAQSITLNHPECYLIVLLIDE
RPEEVTDMQRSVKGEVIASTFDEPATRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLG
RAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLSIIATALIDTGSRMDEVI
FEEFKGTGNSEIILDRKVSDKRIFPAIDITRSGTRKEELLVPPDSLKKTYVLRRILNPMG
VTDAIEFLLDKLRQTKSNADFFDSMNT
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcgaacgacgctctcgctcccgcagacattcccgccgagccgaccctggcg
gcgacggatctcgacacggttcgtgaagtaaagcttcaggacctgaagtcgaagacgccg
accgagctcatcgccttcgccgaagaggtcgaggtcgagaacgcctcgaccatgcgcaag
caggaattgatgttcgcgatcctgaagcagctcgctgccaaggaggtcgagatcatcggc
tcgggcaccgtcgaggtcctgcaggacggtttcggcttcctgcgctcgtcggattccaac
tatctgccgggcccggacgacatctacatttccccgacccagatccgccgcttcggcctg
cgcacgggtgataccgtcgaaggtcccatccgggggccgaaagatggcgagcggtatttc
gcgctgatcaaggtcaacacgatcaatttcgagaaccccgagaagatcaagcacaaggtt
cacttcgacaacctgacgccgctattcccgacgaagcgcttcaagctcgagctggacaat
cccaccaagaaggatttctcgccgcgcatcatcgacatcgtctcgccgatcgggaaaggc
cagcgcgccctgatcgtggcgccgccccggacgggtaagacggtgctgatgcagaacatc
gcccagtcgatcaccctgaatcaccccgagtgctacctgatcgtgctgctcatcgacgag
cggccggaggaagtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcctccacc
ttcgacgagccggccacccgccacgtccaggtcgccgagatggtgatcgagaaggccaag
cgtctggtcgagcacggccgagatgtcgtgatccttctcgactcgatcacccgtctgggc
cgcgcctacaacacggtcgtgccgtcctccggcaaggttctgaccggcggcgtcgacgcc
aatgctctgcagcggccgaagcgtttcttcggcgcggcgcgcaacatcgaagaaggcggc
tctctgtcgatcatcgccacggcgctgatcgataccggctcgcgcatggacgaagtgatc
ttcgaagagttcaagggcaccggcaactccgagatcatcctcgaccggaaagtctccgac
aagcgcatcttcccggcgatcgacatcacccgctcgggcacgcgcaaggaagagcttctg
gttccgccggattctctcaagaagacctatgtcctgcgccggatcctcaacccgatgggc
gtcaccgacgcgatcgagttcctgctggacaagctgcgccagaccaagagcaatgccgat
ttcttcgactcgatgaacacctga
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