KEGG   Mesorhizobium onobrychidis: IHQ72_03945
Entry
IHQ72_03945       CDS       T08462                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
moh  Mesorhizobium onobrychidis
Pathway
moh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:moh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IHQ72_03945 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:moh03021]
    IHQ72_03945 (rho)
   03019 Messenger RNA biogenesis [BR:moh03019]
    IHQ72_03945 (rho)
Transcription machinery [BR:moh03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     IHQ72_03945 (rho)
Messenger RNA biogenesis [BR:moh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     IHQ72_03945 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 NACHT DnaB_C
Other DBs
NCBI-ProteinID: UVC18849
UniProt: A0ABY5R7T3
LinkDB
Position
827948..829213
AA seq 421 aa
MQEMKLTEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKRLATQDIEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTSRLKMEMDVPTSKDISARVIDLVAPLGKGQRALIV
AQPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPA
MDILKSGTRKEDLLVARQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactcaccgagtttaagaacaagaaaccgccagagctgatcgcttat
gccgaatcgctcgaggtcgagaacgccagcgtgatgcgcaagcaggagctgatgttcgca
atcctgaagcggctagcgacgcaggatatcgagatcatcggtgacggcgtggtcgaagtg
ctgcaggacggttttggcttcctgcgctcggccaatgccaattacctgccgggtccggac
gatatctatatttcgccgtcgcagatccggcggttctcgctgaagaccggcgatacggtc
gaaggcccgatccgcagcccgaaggaaggcgagcgctatttcgcgctgctcaaggtcaac
acgatcaatttcgacgacccggaaaagatccgccacaagatccatttcgacaatctgacg
ccgctttatccgacctcgcgactgaagatggaaatggacgttccgacctcgaaggacatc
tcggcgcgcgtcatcgacctggtggcgccgctcggtaaaggccagcgcgccctgatcgtg
gcgcagccgcgcaccggcaagacggtgctcttacagaacatcgcccactcgatcaccacc
aatcatccggaatgctatctgatcgtgctcttgatcgacgagcggccggaggaagtcacc
gatatgcagcgctcggtgaagggcgaggttgtctcctcgaccttcgacgagccggcggtg
cgccacgtccaggtcgccgaaatggtgatcgagaaggccaagcgccttgtcgagcacggg
cgcgacgtcgtcatcctgctggattcgattacccgcctcggccgagcctacaacaccgtg
gtgccgtcatccggcaaggtgctgaccggcggtgtcgacgccaatgcccttcagcggccg
aagcgcttcttcggtgcggctcgcaacatcgaggaaggcggctcgctgaccatcatcgcc
accgcgctgatcgataccggcagccgcatggacgaggtcatcttcgaagaattcaagggc
accggcaactcggaaatcgtgctcgaccgcaaggttgcggacaagcgcatttatccggcc
atggacatcctcaagtccggcacccgcaaggaagacctgctggtcgcccgccaggatctg
cagaagatcttcgtgctgcgccgcatcctggcgccgatgggaacgaccgacgccatcgag
ttcctgatcgacaagctcaagcagaccaagaccaatgcggatttcttcgattcgatgaat
acgtaa

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