Mesorhizobium onobrychidis: IHQ72_04310
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Entry
IHQ72_04310 CDS
T08462
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
moh
Mesorhizobium onobrychidis
Brite
KEGG Orthology (KO) [BR:
moh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
moh03016
]
IHQ72_04310 (thpR)
Enzymes [BR:
moh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IHQ72_04310 (thpR)
Transfer RNA biogenesis [BR:
moh03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IHQ72_04310 (thpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UVC16408
LinkDB
All DBs
Position
complement(909653..910249)
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AA seq
198 aa
AA seq
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MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIANALDR
VHRPSFPLTLSGVGAFGQKKPHAVWAGVSASPDLSALQAEIERICQRLGIPADPRKFMPH
VTLARLRNSSPLDVAQYLSARGNFSTLPFRVSRFVLMSSRHSVGGGPYIVEEAWPLSGAD
SRASSRVASASDASRIMR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcttttcaccgccctcgaaataccgcgagacgccgccctttcgctgtccctg
ctccggggcggcctgcccggggcccgctggatcgacgtcgagaactaccatttgacgctg
cgcttcatcggcgatgtcgagggccatgtcgccgacgagatcgccaacgcgctcgaccgt
gtccaccgcccatccttcccgctgacgctgtccggagtcggcgccttcggccagaagaaa
ccgcatgcggtgtgggccggcgtctccgcctcgcccgacctttcagcactgcaagccgag
atcgagcgcatctgccagcggctcggcatccccgctgatccgcgcaagttcatgccgcat
gtgaccttggcccgcttacgcaattcgagcccgctcgacgtcgcccagtatctttcggca
cgcggcaatttttcgacgctgcccttccgtgtcagccgcttcgtcctgatgtcgtcgcgc
cattcggtcggcggcggaccctacatcgtcgaggaggcctggccgctgtcgggcgccgac
agccgtgcctcgagccgcgtcgccagcgcctccgacgcttcgcggatcatgcggtag
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